Evidence map›Paper›PMID 21625506›Full record

ArticlePloS one2011

The C-terminal domain of the novel essential protein Gcp is critical for interaction with another essential protein YeaZ of Staphylococcus aureus.

Ting Lei, Xudong Liang, Junshu Yang, Meiying Yan, Li Zheng, Bruce Walcheck, Yinduo Ji

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ting LeiDepartment of Veterinary Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, St. Paul, Minnesota, United States of America.
Xudong Liang
Junshu Yang
Meiying Yan
Li Zheng
Bruce Walcheck
Yinduo Ji
University of Minnesota · US

Funding

Biomarker Screening of Essential Putative Glycoprotease InhibitorR01AI078951 · NIAID · UNIVERSITY OF MINNESOTA · PI JI, YINDUO · 2010 to 2012
$1.1M
Novel antibacterial target: an essential glycoproteaseR21AI065740 · NIAID · UNIVERSITY OF MINNESOTA · PI JI, YINDUO · 2006 to 2007
$403k
NIAID NIH HHS AI065740NIAID NIH HHS AI078951NIAID NIH HHS R01 AI078951NIAID NIH HHS R21 AI065740
6 · The paper itself

Abstract

Previous studies have demonstrated that the novel protein Gcp is essential for the viability of various bacterial species including Staphylococcus aureus; however, the reason why it is required for bacterial growth remains unclear. In order to explore the potential mechanisms of this essentiality, we performed RT-PCR analysis and revealed that the gcp gene (sa1854) was co-transcribed with sa1855, yeaZ (sa1856) and sa1857 genes, indicating these genes are located in the same operon. Furthermore, we demonstrated that Gcp interacts with YeaZ using a yeast two-hybrid (Y2H) system and in vitro pull down assays. To characterize the Gcp-YeaZ interaction, we performed alanine scanning mutagenesis on the residues of C-terminal segment of Gcp. We found that the mutations of the C-terminal Y317-F322 region abolished the interaction of Gcp and YeaZ, and the mutations of the D324-N329 and S332-Y336 regions alleviated Gcp binding to YeaZ. More importantly, we demonstrated that these key regions of Gcp are also necessary for the bacterial survival since these mutated Gcp could not complement the depletion of endogenous Gcp. Taken together, our data suggest that the interaction of Gcp and YeaZ may contribute to the essentiality of Gcp for S. aureus survival. Our findings provide new insights into the potential mechanisms and biological functions of this novel essential protein.

Indexed as

AlanineBacterial ProteinsBase SequenceCloning, MolecularDNA PrimersMutagenesisPeptide HydrolasesPlasmidsProtein BindingReverse Transcriptase Polymerase Chain ReactionStaphylococcus aureusTwo-Hybrid System TechniquesAlanineBacterial ProteinsDNA PrimersGcp glycoprotease, Staphylococcus aureusPeptide Hydrolases

Identifiers

PMID21625506
PMCPMC3098269
OpenAlexW2003019866

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.