Evidence map›Paper›PMID 21625003›Full record

ArticleGenetics2011

Anterior-posterior axis specification in Drosophila oocytes: identification of novel bicoid and oskar mRNA localization factors.

Chin-Wen Chang, Dmitry Nashchekin, Lucy Wheatley, Uwe Irion, Katja Dahlgaard, Tessa G Montague, Jacqueline Hall, Daniel St Johnston

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. TheMicrobiology spectrum · 2019
    Review
  9. Review
  10. Article
  11. eLife · 2017
    Article
  12. Causes and evolutionary consequences of primordial germ-cell specification mode in metazoans.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Abiotic stress miRNomes in the Triticeae.Functional & integrative genomics · 2017
    Review
  14. The rich somatic life of Wolbachia.MicrobiologyOpen · 2016
    Review
  15. eLife · 2016
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chin-Wen ChangThe Gurdon Institute and the Department of Genetics, University of Cambridge, Cambridge CB2 1QN, UK.
Dmitry Nashchekin
Lucy Wheatley
Uwe Irion
Katja Dahlgaard
Tessa G Montague
Jacqueline Hall
Daniel St Johnston
Wellcome/Cancer Research UK Gurdon Institute · GBUniversity of Cambridge · GB

Funding

Cancer Research UK A14492Wellcome Trust 080007Wellcome Trust 092096
6 · The paper itself

Abstract

The Drosophila melanogaster anterior-posterior axis is established during oogenesis by the localization of bicoid and oskar mRNAs to the anterior and posterior poles of the oocyte. Although genetic screens have identified some trans-acting factors required for the localization of these transcripts, other factors may have been missed because they also function at other stages of oogenesis. To circumvent this problem, we performed a screen for revertants and dominant suppressors of the bicaudal phenotype caused by expressing Miranda-GFP in the female germline. Miranda mislocalizes oskar mRNA/Staufen complexes to the oocyte anterior by coupling them to the bicoid localization pathway, resulting in the formation of an anterior abdomen in place of the head. In one class of revertants, Miranda still binds Staufen/oskar mRNA complexes, but does not localize to the anterior, identifying an anterior targeting domain at the N terminus of Miranda. This has an almost identical sequence to the N terminus of vertebrate RHAMM, which is also a large coiled-coil protein, suggesting that it may be a divergent Miranda ortholog. In addition, we recovered 30 dominant suppressors, including multiple alleles of the spectroplakin, short stop, a lethal complementation group that prevents oskar mRNA anchoring, and a female sterile complementation group that disrupts the anterior localization of bicoid mRNA in late oogenesis. One of the single allele suppressors proved to be a mutation in the actin nucleator, Cappuccino, revealing a previously unrecognized function of Cappuccino in pole plasm anchoring and the induction of actin filaments by Long Oskar protein.

Indexed as

Amino Acid SequenceAnimalsCell Cycle ProteinsDrosophila melanogasterDrosophila ProteinsFemaleGenes, DominantHomeodomain ProteinsMaleMicrofilament ProteinsMolecular Sequence DataMutationOocytesOogenesisRNA, MessengerSequence Alignmentbcd protein, Drosophilacapu protein, DrosophilaCell Cycle ProteinsDrosophila ProteinsHomeodomain ProteinsMicrofilament ProteinsMira protein, Drosophilaosk protein, DrosophilaRNA, Messengerspir protein, DrosophilaTrans-Activators

Identifiers

PMID21625003
PMCPMC3176101
OpenAlexW2076969689

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.