Evidence map›Paper›PMID 21624946›Full record

ArticleThe Journal of general physiology2011

A kinetic analysis of protein transport through the anthrax toxin channel.

Daniel Basilio, Paul K Kienker, Stephen W Briggs, Alan Finkelstein

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Designing inhibitors of anthrax toxin.Expert opinion on drug discovery · 2014
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Ratcheting up protein translocation with anthrax toxin.Protein science : a publication of the Protein Society · 2012
    Review
  13. Ultrasensitive detection of protein translocated through toxin pores in droplet-interface bilayers.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Daniel BasilioDepartment of Physiology and Biophysics, Albert Einstein College of Medicine, Bronx, NY 10461, USA. dab2043@-med.cornell.edu
Paul K Kienker
Stephen W Briggs
Alan Finkelstein
Albert Einstein College of Medicine · US

Funding

INTERACTION OF MODEL SYNAPTIC VESICLES WITH LIPID BILAYR01GM029210 · NIGMS · YESHIVA UNIVERSITY · PI FINKELSTEIN, ALAN · 1985 to 2013
$6.0M
GATING OF PROTEIN CHANNELS IN LIPID BILAYER MEMBRANESR37GM029210 · NIGMS · YESHIVA UNIVERSITY · PI FINKELSTEIN, ALAN · 1995 to 2004
$3.5M
NIGMS NIH HHS GM-29210NIGMS NIH HHS R01 GM029210NIGMS NIH HHS R37 GM029210
6 · The paper itself

Abstract

Anthrax toxin is composed of three proteins: a translocase heptameric channel, (PA(63))(7), formed from protective antigen (PA), which allows the other two proteins, lethal factor (LF) and edema factor (EF), to translocate across a host cell's endosomal membrane, disrupting cellular homeostasis. (PA(63))(7) incorporated into planar phospholipid bilayer membranes forms a channel capable of transporting LF and EF. Protein translocation through the channel can be driven by voltage on a timescale of seconds. A characteristic of the translocation of LF(N), the N-terminal 263 residues of LF, is its S-shaped kinetics. Because all of the translocation experiments reported in the literature have been performed with more than one LF(N) molecule bound to most of the channels, it is not clear whether the S-shaped kinetics are an intrinsic characteristic of translocation kinetics or are merely a consequence of the translocation in tandem of two or three LF(N)s. In this paper, we show both in macroscopic and single-channel experiments that even with only one LF(N) bound to the channel, the translocation kinetics are S shaped. As expected, the translocation rate is slower with more than one LF(N) bound. We also present a simple electrodiffusion model of translocation in which LF(N) is represented as a charged rod that moves subject to both Brownian motion and an applied electric field. The cumulative distribution of first-passage times of the rod past the end of the channel displays S-shaped kinetics with a voltage dependence in agreement with experimental data.

Indexed as

Antigens, BacterialBacillus anthracisBacterial ToxinsCell MembraneModels, MolecularMutationProtein ConformationProtein Transportanthrax toxinAntigens, BacterialBacterial Toxins

Identifiers

PMID21624946
PMCPMC3105512
OpenAlexW2127131719

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.