Evidence map›Paper›PMID 21624896›Full record

ArticleDatabase : the journal of biological databases and curation2011

MaizeGDB: curation and outreach go hand-in-hand.

Mary L Schaeffer, Lisa C Harper, Jack M Gardiner, Carson M Andorf, Darwin A Campbell, Ethalinda K S Cannon, Taner Z Sen, Carolyn J Lawrence

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Genome-Wide Association Analysis of Senescence-Related Traits in Maize.International journal of molecular sciences · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. MaizeDIG: Maize Database of Images and Genomes.Frontiers in plant science · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Web resources for model organism studies.Genomics, proteomics & bioinformatics · 2015
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mary L SchaefferUSDA-ARS Plant Genetics Research Unit and Division of Plant Sciences, Department of Agronomy, University of Missouri, Columbia, MO 65211, USA. mary.schaeffer@ars.usda.gov
Lisa C Harper
Jack M Gardiner
Carson M Andorf
Darwin A Campbell
Ethalinda K S Cannon
Taner Z Sen
Carolyn J Lawrence

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

First released in 1991 with the name MaizeDB, the Maize Genetics and Genomics Database, now MaizeGDB, celebrates its 20th anniversary this year. MaizeGDB has transitioned from a focus on comprehensive curation of the literature, genetic maps and stocks to a paradigm that accommodates the recent release of a reference maize genome sequence, multiple diverse maize genomes and sequence-based gene expression data sets. The MaizeGDB Team is relatively small, and relies heavily on the research community to provide data, nomenclature standards and most importantly, to recommend future directions, priorities and strategies. Key aspects of MaizeGDB's intimate interaction with the community are the co-location of curators with maize research groups in multiple locations across the USA as well as coordination with MaizeGDB's close partner, the Maize Genetics Cooperation--Stock Center. In this report, we describe how the MaizeGDB Team currently interacts with the maize research community and our plan for future interactions that will support updates to the functional and structural annotation of the B73 reference genome.

Indexed as

Databases, GeneticGenomicsMolecular Sequence AnnotationGenome, PlantZea mays

Identifiers

PMID21624896
PMCPMC3104940

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.