Evidence map›Paper›PMID 21623541›Full record

ArticleNucleosides, nucleotides & nucleic acids2011

Mild detritylation of nucleic acid hydroxyl groups by warming up.

Jozef Salon, Bo Zhang, Zhen Huang

Abstract read
In one paragraph

Article in Nucleosides, nucleotides & nucleic acids, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jozef SalonDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA.
Bo Zhang
Zhen Huang

Funding

Efficient Synthesis of Se-DNAs and Se-RNAs for Structure and Function StudiesR41GM095086 · NIGMS · SENA RESEARCH, INC. · PI HUANG, ZHEN · 2010 to 2010
$163k
NIGMS NIH HHS GM095086NIGMS NIH HHS R41 GM095086
6 · The paper itself

Abstract

It is challenging to effectively deprotect hydroxyl groups of acid-or-base sensitive bio-macromolecules without causing even minor defects and compromising high quality of final products. We report here a mild detritylation strategy in mildly acidic buffers to remove the DMTr protection from the 5'-hydroxyl groups of synthetic nucleic acids. The DMTr-groups can be easily and effectively removed at pH 4.5 or 5.0 with slight warming up (40 °C), offering virtually quantitative deprotection. This warming-up strategy is particularly useful for deprotection of the modified nucleic acids that are sensitive to the conventional acid deprotection. As a first step towards our long-term goal of synthesizing defect-free nucleic acids, our novel and simple strategy further increases the quality of synthetic nucleic acids.

Indexed as

Hot TemperatureBase SequenceDNAHydrogen-Ion ConcentrationHydroxidesRNATriphenylmethyl CompoundsDNAhydroxide ionHydroxidesRNATriphenylmethyl Compounds

Identifiers

PMID21623541
PMCPMC3228844

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.