Evidence map›Paper›PMID 21622940›Full record

ArticleCarcinogenesis2011

Single-nucleotide polymorphisms in DNA repair genes and association with breast cancer risk in the web study.

Michelle R Roberts, Peter G Shields, Christine B Ambrosone, Jing Nie, Catalin Marian, Shiva S Krishnan, David S Goerlitz, Ramakrishna Modali, Michael Seddon, Teresa Lehman and 4 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Carcinogenesis, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 10 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 10 pooled it
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 10 syntheses or guidelines pooled it, 53 citations in OpenAlex.

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  20. Analysis of DNA Repair Genes Polymorphisms in Breast Cancer.Pathology oncology research : POR · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 1 country.

Michelle R RobertsDepartment of Social and Preventive Medicine, University at Buffalo, Buffalo, NY 14214, USA. michelle.roberts@roswellpark.org
Peter G Shields
Christine B Ambrosone
Jing Nie
Catalin Marian
Shiva S Krishnan
David S Goerlitz
Ramakrishna Modali
Michael Seddon
Teresa Lehman
Kandace L Amend
Maurizio Trevisan
Stephen B Edge
Jo L Freudenheim
NatureServe · USUniversity at Buffalo, State University of New York · USGeorgetown University · USGeorgetown University Medical Center · USRoswell Park Comprehensive Cancer Center · USNational Patient Safety Foundation · USUniversity of Nevada, Las Vegas · US

Funding

VITAMIN C (ASCORBATE) METABOLISM IN DROSPHILA MELANOGASTERP41RR013461 · NCRR · UNIVERSITY OF CALIF-LAWRNC LVRMR NAT LAB · PI HASKELL, MARJORIE J · 1999 to 2011
$20.8M
Interdisciplinary Training in Cancer Epidemiology at UBR25CA113951 · NCI · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI FREUDENHEIM, JO L., MOYSICH, KIRSTEN B. · 2007 to 2016
$2.5M
Methylation and Oxidation in Breast Cancer EpidemiologyR01CA092040 · NCI · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI FREUDENHEIM, JO L · 2002 to 2005
$2.5M
PILOT--GEOGRAPHIC INFORMATION SYSTEM FOR ALCOHOL STUDIESP50AA009802 · NIAAA · RESEARCH INSTITUTE ON ADDICTIONS · PI TREVISAN, MAURIZO · 1994 to 1998
–
NCI NIH HHS R01 CA092040NCI NIH HHS R01CA92040NCI NIH HHS R25 CA113951NCI NIH HHS R25CA11395102NCRR NIH HHS P41 RR013461NIAAA NIH HHS P50 AA009802NIAAA NIH HHS P50AA09802
6 · The paper itself

Abstract

Base excision repair (BER) and nucleotide excision repair (NER) pathways repair damaged DNA, and polymorphisms in these genes might affect breast cancer susceptibility. We evaluated associations between seven single-nucleotide polymorphisms in four DNA repair genes (ERCC4 rs1799801, XPC rs2227998, rs2228001, rs2228000, OGG1 rs1052133 and XRCC1 rs25487 and rs25486) and breast cancer risk, examining modification by smoking and alcohol consumption, using data from the Western New York Exposures and Breast Cancer Study. Women aged 35-79 years with incident breast cancer (n = 1170) and age- and race-matched controls (n = 2115) were enrolled. Genotyping was performed using matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Unconditional logistic regression was used to estimate odds ratios (OR) and 95% confidence intervals (CIs). No significant associations were observed in premenopausal women. Among postmenopausal women, rs25487 and rs25486 (OR = 1.24; 95% CI 1.01-1.51 and OR = 1.23; 95% CI 1.01-1.49, respectively, for combined heterozygous and homozygous variant compared with reference) were associated with increased risk of breast cancer. Postmenopausal women carrying the variant allele of the synonymous XPC polymorphism (rs2227998) were also at borderline significantly increased risk (OR = 1.24; 95% CI 1.01-1.52, heterozygous variant compared with reference; OR = 1.22; 95% CI 1.01-1.48, for combined heterozygous and homozygous variant compared with reference). There was no evidence of genotype-smoking and genotype-alcohol consumption interactions for pre- and postmenopausal women. These results indicate that some of the variants in BER and NER genes may influence risk of postmenopausal breast cancer.

Indexed as

AdultAgedBreast NeoplasmsCase-Control StudiesDNA-Binding ProteinsDNA DamageDNA GlycosylasesDNA RepairFemaleGenetic Predisposition to DiseaseGenotypeHumansMenopauseMiddle AgedNew YorkPolymerase Chain ReactionDNA-Binding ProteinsDNA Glycosylasesoxoguanine glycosylase 1, humanxeroderma pigmentosum group F proteinXPC protein, humanX-ray Repair Cross Complementing Protein 1XRCC1 protein, human

Identifiers

PMID21622940
PMCPMC3149207
OpenAlexW2134814911

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.