Evidence map›Paper›PMID 21622799›Full record

ArticleApplied and environmental microbiology2011

Diversity, abundance, and potential activity of nitrifying and nitrate-reducing microbial assemblages in a subglacial ecosystem.

Eric S Boyd, Rachel K Lange, Andrew C Mitchell, Jeff R Havig, Trinity L Hamilton, Melissa J Lafrenière, Everett L Shock, John W Peters, Mark Skidmore

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 145 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. The microbiome of cryospheric ecosystems.Nature communications · 2022
    Article
  9. Article
  10. Article
  11. Lithogenic hydrogen supports microbial primary production in subglacial and proglacial environments.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  12. Article
  13. Cold AdaptedMicroorganisms · 2019
    Article
  14. HJournal of microbiology (Seoul, Korea) · 2019
    Article
  15. Review
  16. Article
  17. Article
  18. The microbiome of glaciers and ice sheets.NPJ biofilms and microbiomes · 2017
    Article
  19. Elevated NEnvironmental science and pollution research international · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Eric S BoydDepartment of Chemistry and Biochemistry and the Astrobiology Biogeocatalysis Research Center, Montana State University, Bozeman, MT 59717, USA. eboyd@montana.edu
Rachel K Lange
Andrew C Mitchell
Jeff R Havig
Trinity L Hamilton
Melissa J Lafrenière
Everett L Shock
John W Peters
Mark Skidmore
Montana State University · USArizona State University · USQueen's University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Subglacial sediments sampled from beneath Robertson Glacier (RG), Alberta, Canada, were shown to harbor diverse assemblages of potential nitrifiers, nitrate reducers, and diazotrophs, as assessed by amoA, narG, and nifH gene biomarker diversity. Although archaeal amoA genes were detected, they were less abundant and less diverse than bacterial amoA, suggesting that bacteria are the predominant nitrifiers in RG sediments. Maximum nitrification and nitrate reduction rates in microcosms incubated at 4°C were 280 and 18.5 nmol of N per g of dry weight sediment per day, respectively, indicating the potential for these processes to occur in situ. Geochemical analyses of subglacial sediment pore waters and bulk subglacial meltwaters revealed low concentrations of inorganic and organic nitrogen compounds. These data, when coupled with a C/N atomic ratio of dissolved organic matter in subglacial pore waters of ~210, indicate that the sediment communities are N limited. This may reflect the combined biological activities of organic N mineralization, nitrification, and nitrate reduction. Despite evidence of N limitation and the detection of nifH, we were unable to detect biological nitrogen fixation activity in subglacial sediments. Collectively, the results presented here suggest a role for nitrification and nitrate reduction in sustaining microbial life in subglacial environments. Considering that ice currently covers 11% of the terrestrial landmass and has covered significantly greater portions of Earth at times in the past, the demonstration of nitrification and nitrate reduction in subglacial environments furthers our understanding of the potential for these environments to contribute to global biogeochemical cycles on glacial-interglacial timescales.

Indexed as

EcosystemNitrogen FixationBacterial Physiological PhenomenaCanadaCold TemperatureEscherichia coli ProteinsGeologic SedimentsIce CoverMolecular Sequence DataNitrate ReductaseNitratesNitrificationOxidoreductasesPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNAEscherichia coli ProteinsNarG protein, E coliNitrate ReductaseNitratesnitrogenase reductaseOxidoreductasesRNA, Ribosomal, 16S

Identifiers

PMID21622799
PMCPMC3147365
OpenAlexW2128047456

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.