Evidence map›Paper›PMID 21619679›Full record

ArticleBMC evolutionary biology2011

The evolutionary history of the SAL1 gene family in eutherian mammals.

Camille Meslin, Fanny Brimau, Patricia Nagnan-Le Meillour, Isabelle Callebaut, Géraldine Pascal, Philippe Monget

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

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  10. The genomic basis of vomeronasal-mediated behaviour.Mammalian genome : official journal of the International Mammalian Genome Society · 2014
    Review
  11. Article
  12. New genes as drivers of phenotypic evolution.Nature reviews. Genetics · 2013
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Camille MeslinUMR85 Physiologie de la Reproduction et des Comportements, INRA, Nouzilly, France.
Fanny Brimau
Patricia Nagnan-Le Meillour
Isabelle Callebaut
Géraldine Pascal
Philippe Monget
Centre National de la Recherche Scientifique · FRBiologie des Oiseaux et Aviculture · FRInstitut de minéralogie, de physique des matériaux et de cosmochimie · FRPhysiologie de la Reproduction et des Comportements · FRUnité de Glycobiologie Structurale et Fonctionnelle · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSAL1 (salivary lipocalin) is a member of the OBP (Odorant Binding Protein) family and is involved in chemical sexual communication in pig. SAL1 and its relatives may be involved in pheromone and olfactory receptor binding and in pre-mating behaviour. The evolutionary history and the selective pressures acting on SAL1 and its orthologous genes have not yet been exhaustively described. The aim of the present work was to study the evolution of these genes, to elucidate the role of selective pressures in their evolution and the consequences for their functions.

resultsHere, we present the evolutionary history of SAL1 gene and its orthologous genes in mammals. We found that (1) SAL1 and its related genes arose in eutherian mammals with lineage-specific duplications in rodents, horse and cow and are lost in human, mouse lemur, bushbaby and orangutan, (2) the evolution of duplicated genes of horse, rat, mouse and guinea pig is driven by concerted evolution with extensive gene conversion events in mouse and guinea pig and by positive selection mainly acting on paralogous genes in horse and guinea pig, (3) positive selection was detected for amino acids involved in pheromone binding and amino acids putatively involved in olfactory receptor binding, (4) positive selection was also found for lineage, indicating a species-specific strategy for amino acid selection.

conclusionsThis work provides new insights into the evolutionary history of SAL1 and its orthologs. On one hand, some genes are subject to concerted evolution and to an increase in dosage, suggesting the need for homogeneity of sequence and function in certain species. On the other hand, positive selection plays a role in the diversification of the functions of the family and in lineage, suggesting adaptive evolution, with possible consequences for speciation and for the reinforcement of prezygotic barriers.

Indexed as

Evolution, MolecularAmino Acid SequenceAnimalsCattleDogsGene DuplicationGuinea PigsHumansLipocalin 1MiceModels, MolecularMolecular Sequence DataPhylogenyRatsSalivary Proteins and PeptidesLipocalin 1Salivary Proteins and Peptides

Identifiers

PMID21619679
PMCPMC3128046
OpenAlexW2085922872

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.