Evidence map›Paper›PMID 21615117›Full record

ArticleACS chemical biology2011

Selective inhibition of the K(ir)2 family of inward rectifier potassium channels by a small molecule probe: the discovery, SAR, and pharmacological characterization of ML133.

Hao-Ran Wang, Meng Wu, Haibo Yu, Shunyou Long, Amy Stevens, Darren W Engers, Henry Sackin, J Scott Daniels, Eric S Dawson, Corey R Hopkins and 3 more

Abstract read
In one paragraph

Article in ACS chemical biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 97 citations in OpenAlex.

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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Hao-Ran WangDepartment of Neuroscience, High Throughput Biology Center and Johns Hopkins Ion Channel Center, School of Medicine, Johns Hopkins University, 733 North Broadway, Baltimore, Maryland 21205, United States.
Meng Wu
Haibo Yu
Shunyou Long
Amy Stevens
Darren W Engers
Henry Sackin
J Scott Daniels
Eric S Dawson
Corey R Hopkins
Craig W Lindsley
Min Li
Owen B McManus
Vanderbilt University Medical Center · USJohns Hopkins University · USHigh Throughput Biology (United States) · USRosalind Franklin University of Medicine and Science · US

Funding

The Vanderbilt Specialized Chemistry Center for Accelerated Probe DevelopmentU54MH084659 · NIMH · VANDERBILT UNIVERSITY · PI LINDSLEY, CRAIG · 2008 to 2013
$24.1M
Johns Hopkins Ion Channel CenterU54MH084691 · NIMH · JOHNS HOPKINS UNIVERSITY · PI LI, MIN · 2008 to 2012
$13.9M
Vanderbilt NCDDDG for Discovery of Novel Treatments for SchizophreniaU01MH087965 · NIMH · VANDERBILT UNIVERSITY · PI LINDSLEY, CRAIG · 2010 to 2014
$9.3M
MOLECULAR CLONING OF EPITHELIAL K CHANNELSR01DK046950 · NIDDK · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI SACKIN, HENRY · 1996 to 2017
$5.4M
Molecular regulation of calcium-activated (BK) potassium channelsR01GM078579 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI LI, MIN · 2007 to 2010
$1.2M
NIDDK NIH HHS R01 DK046950NIGMS NIH HHS GM078579NIGMS NIH HHS R01 GM078579NIMH NIH HHS MH084691NIMH NIH HHS U01 MH087965NIMH NIH HHS U01MH087965NIMH NIH HHS U54 MH084659NIMH NIH HHS U54 MH084691
6 · The paper itself

Abstract

The K(ir) inward rectifying potassium channels have a broad tissue distribution and are implicated in a variety of functional roles. At least seven classes (K(ir)1-K(ir)7) of structurally related inward rectifier potassium channels are known, and there are no selective small molecule tools to study their function. In an effort to develop selective K(ir)2.1 inhibitors, we performed a high-throughput screen (HTS) of more than 300,000 small molecules within the MLPCN for modulators of K(ir)2.1 function. Here we report one potent K(ir)2.1 inhibitor, ML133, which inhibits K(ir)2.1 with an IC(50) of 1.8 μM at pH 7.4 and 290 nM at pH 8.5 but exhibits little selectivity against other members of Kir2.x family channels. However, ML133 has no effect on K(ir)1.1 (IC(50) > 300 μM) and displays weak activity for K(ir)4.1 (76 μM) and K(ir)7.1 (33 μM), making ML133 the most selective small molecule inhibitor of the K(ir) family reported to date. Because of the high homology within the K(ir)2 family-the channels share a common design of a pore region flanked by two transmembrane domains-identification of site(s) critical for isoform specificity would be an important basis for future development of more specific and potent K(ir) inhibitors. Using chimeric channels between K(ir)2.1 and K(ir)1.1 and site-directed mutagenesis, we have identified D172 and I176 within M2 segment of K(ir)2.1 as molecular determinants critical for the potency of ML133 mediated inhibition. Double mutation of the corresponding residues of K(ir)1.1 to those of K(ir)2.1 (N171D and C175I) transplants ML133 inhibition to K(ir)1.1. Together, the combination of a potent, K(ir)2 family selective inhibitor and identification of molecular determinants for the specificity provides both a tool and a model system to enable further mechanistic studies of modulation of K(ir)2 inward rectifier potassium channels.

Indexed as

Amino Acid SequenceAnimalsCell LineDrug DesignHigh-Throughput Screening AssaysHumansModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedPotassium Channels, Inwardly RectifyingSequence AlignmentSmall Molecule LibrariesStructure-Activity Relationshipinward rectifier potassium channel 2Potassium Channels, Inwardly RectifyingSmall Molecule Libraries

Identifiers

PMID21615117
PMCPMC3177608
OpenAlexW1980266228

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.