ArticleEuropean journal of human genetics : EJHG2011
GWAS Integrator: a bioinformatics tool to explore human genetic associations reported in published genome-wide association studies.
Article in European journal of human genetics : EJHG, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
23 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Six novel susceptibility Loci for early-onset androgenetic alopecia and their unexpected association with common diseases.PLoS genetics · 2012Pooled it
- A molecular view of amyotrophic lateral sclerosis through the lens of interaction network modules.PloS one · 2022Article
- Replication of chromosomal loci involved in Parkinson's disease: A quantitative synthesis of GWAS.Toxicology reports · 2021Article
- MiR-21 binding site SNP within ITGAM associated with psoriasis susceptibility in women.PloS one · 2019Article
- Gene annotation bias impedes biomedical research.Scientific reports · 2018Article
- Association of Genome-Wide Association Study (GWAS) Identified SNPs and Risk of Breast Cancer in an Indian Population.Scientific reports · 2017Article
- Search Datasets in Literature: A Case Study of GWAS.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2017Article
- Article
- 17q21 asthma-risk variants switch CTCF binding and regulate IL-2 production by T cells.Nature communications · 2016Article
- The Qatar genome: a population-specific tool for precision medicine in the Middle East.Human genome variation · 2016Article
- Patterns and functional implications of rare germline variants across 12 cancer types.Nature communications · 2015Article
- Sequence to Medical Phenotypes: A Framework for Interpretation of Human Whole Genome DNA Sequence Data.PLoS genetics · 2015Article
- Genetics of alcoholism.Current psychiatry reports · 2014Review
- Epigenomic analysis of primary human T cells reveals enhancers associated with TH2 memory cell differentiation and asthma susceptibility.Nature immunology · 2014Article
- Integrative analysis of the transcriptome profiles observed in type 1, type 2 and gestational diabetes mellitus reveals the role of inflammation.BMC medical genomics · 2014Article
- How can polygenic inheritance be used in population screening for common diseases?Genetics in medicine : official journal of the American College of Medical Genetics · 2013Review
- Functional relevance for associations between genetic variants and systemic lupus erythematosus.PloS one · 2013Article
- metabolicMine: an integrated genomics, genetics and proteomics data warehouse for common metabolic disease research.Database : the journal of biological databases and curation · 2013Article
- Predicting cell types and genetic variations contributing to disease by combining GWAS and epigenetic data.PloS one · 2013Article
- Cytokine gene polymorphisms and human autoimmune disease in the era of genome-wide association studies.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2012Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Genome-wide association studies (GWAS) have successfully identified numerous genetic loci that are associated with phenotypic traits and diseases. GWAS Integrator is a bioinformatics tool that integrates information on these associations from the National Human Genome Research institute (NHGRI) Catalog, SNAP (SNP Annotation and Proxy Search), and the Human Genome Epidemiology (HuGE) Navigator literature database. This tool includes robust search and data mining functionalities that can be used to quickly identify relevant associations from GWAS, as well as proxy single-nucleotide polymorphisms (SNPs) and potential candidate genes. Query-based University of California Santa Cruz (UCSC) Genome Browser custom tracks are generated dynamically on the basis of users' selected GWAS hits or candidate genes from HuGE Navigator literature database (http://www.hugenavigator.net/HuGENavigator/gWAHitStartPage.do). The GWAS Integrator may help enhance inference on potential genetic associations identified from GWAS studies.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.