Evidence map›Paper›PMID 21610222›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2011

Variation in TP63 is associated with lung adenocarcinoma in the UK population.

Yufei Wang, Peter Broderick, Athena Matakidou, Jayaram Vijayakrishnan, Timothy Eisen, Richard S Houlston

Open access · bronzeAbstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 3 pooled it
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 3 syntheses or guidelines pooled it, 32 citations in OpenAlex.

  1. Pooled it
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  10. Polymorphism in theAfrican health sciences · 2021
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  13. Lung Cancer Risk in Never-Smokers of European Descent is Associated With Genetic Variation in the 5Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2019
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  17. Genetic variation in the TP63 gene is associated with lung cancer risk in the Han population.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yufei WangSection of Cancer Genetics, Institute of Cancer Research, Sutton, Surrey, UK.
Peter Broderick
Athena Matakidou
Jayaram Vijayakrishnan
Timothy Eisen
Richard S Houlston
Institute of Cancer Research · GB

Funding

Cancer Research UK A8362Cancer Research UK C1298/A8362Cancer Research UK C1298/A8780Wellcome Trust
6 · The paper itself

Abstract

backgroundVariation at TP63 has recently been shown to be associated with lung adenocarcinoma in the Asian population.

methodsTo investigate how this finding translates to the European population we compared the genotypes of SNPs annotating the TP63 locus at 3q28 in 4,462 lung cancer patients, including 911 with adenocarcinoma, and 8,235 controls from the United Kingdom.

resultsA statistically significant association between adenocarcinoma risk and SNP genotype was shown: rs10937405, OR = 1.21, P = 1.82 × 10(-4); rs17429138, OR = 1.23, P = 7.49 × 10(-5); and rs4396880, OR = 1.21, P = 2.03 × 10(-4). Haplotype analysis was consistent with a single TP63 risk locus defined by SNPs rs10937405, rs17429138, and rs4396880. While no association between SNPs and small cell lung cancer was shown, the rs10937405 and rs439680 associations were significant for squamous cancer (respective P-values, 0.0022 and 0.02).

conclusionsThese findings show TP63 variation is a risk factor for the development of lung adenocarcinoma in the UK population. Furthermore, they provide additional insight into the subtype-specificity of the 3q28 lung cancer association. IMPACT: Our data confirm the association of 3q28 with lung adenocarcinoma and that this association is not confined to the Asian population. Elucidating the functional basis of this association will be contingent on future fine mapping of the TP63 loci.

Indexed as

Genetic Predisposition to DiseaseAdenocarcinomaAgedCase-Control StudiesFemaleGenotypeHumansLung NeoplasmsMaleMiddle AgedPolymorphism, Single NucleotideRisk FactorsTranscription FactorsTumor Suppressor ProteinsUnited KingdomWhite PeopleTP63 protein, humanTranscription FactorsTumor Suppressor Proteins

Identifiers

PMID21610222
PMCPMC5108419
OpenAlexW2092423598

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.