Evidence map›Paper›PMID 21610089›Full record

ArticleJournal of cell science2011

Dynamic interaction of Y RNAs with chromatin and initiation proteins during human DNA replication.

Alice Tianbu Zhang, Alexander R Langley, Christo P Christov, Eyemen Kheir, Thomas Shafee, Timothy J Gardiner, Torsten Krude

Open access · greenAbstract read
In one paragraph

Article in Journal of cell science, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 91 citations in OpenAlex.

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  16. Y RNAs: Biogenesis, Function and Implications for the Cardiovascular System.Advances in experimental medicine and biology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Alice Tianbu ZhangDepartment of Zoology, University of Cambridge, Downing Street, Cambridge CB23EJ, UK.
Alexander R Langley
Christo P Christov
Eyemen Kheir
Thomas Shafee
Timothy J Gardiner
Torsten Krude
University of Cambridge · GB

Funding

Cancer Research UK C1471/A10308Cancer Research UK C1471/A8448Medical Research CouncilWellcome TrustWorldwide Cancer Research 10-0570
6 · The paper itself

Abstract

Non-coding Y RNAs are required for the initiation of chromosomal DNA replication in mammalian cells. It is unknown how they perform this function or if they associate with a nuclear structure during DNA replication. Here, we investigate the association of Y RNAs with chromatin and their interaction with replication proteins during DNA replication in a human cell-free system. Our results show that fluorescently labelled Y RNAs associate with unreplicated euchromatin in late G1 phase cell nuclei before the initiation of DNA replication. Following initiation, Y RNAs are displaced locally from nascent and replicated DNA present in replication foci. In intact human cells, a substantial fraction of endogenous Y RNAs are associated with G1 phase nuclei, but not with G2 phase nuclei. Y RNAs interact and colocalise with the origin recognition complex (ORC), the pre-replication complex (pre-RC) protein Cdt1, and other proteins implicated in the initiation of DNA replication. These data support a molecular 'catch and release' mechanism for Y RNA function during the initiation of chromosomal DNA replication, which is consistent with Y RNAs acting as replication licensing factors.

Indexed as

DNA ReplicationBase SequenceCell Cycle ProteinsChromatinEuchromatinG1 PhaseHumansMicroscopy, ConfocalMolecular Sequence DataOrigin Recognition ComplexRNA, UntranslatedCell Cycle ProteinsChromatinEuchromatinOrigin Recognition ComplexRNA, Untranslated

Identifiers

PMID21610089
PMCPMC3104036
OpenAlexW2042670878

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.