Evidence map›Paper›PMID 21606328›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Human telomerase model shows the role of the TEN domain in advancing the double helix for the next polymerization step.

Kamil Steczkiewicz, Michael T Zimmermann, Mateusz Kurcinski, Benjamin A Lewis, Drena Dobbs, Andrzej Kloczkowski, Robert L Jernigan, Andrzej Kolinski, Krzysztof Ginalski

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Single-Molecule Analysis of Reverse Transcriptase Enzymes.Cold Spring Harbor perspectives in biology · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Progress in structural studies of telomerase.Current opinion in structural biology · 2014
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kamil SteczkiewiczInterdisciplinary Centre for Mathematical and Computational Modelling, University of Warsaw, Warsaw, Poland.
Michael T Zimmermann
Mateusz Kurcinski
Benjamin A Lewis
Drena Dobbs
Andrzej Kloczkowski
Robert L Jernigan
Andrzej Kolinski
Krzysztof Ginalski

Funding

Coarse-Grained Models of ProteinsR01GM072014 · NIGMS · IOWA STATE UNIVERSITY · PI JERNIGAN, ROBERT L · 2004 to 2012
$2.3M
Modeling Ribosomal Control, Function and AssemblyR01GM073095 · NIGMS · IOWA STATE UNIVERSITY · PI JERNIGAN, ROBERT L · 2006 to 2009
$1.0M
High-Accuracy Protein Models Derived from Lower Resolution DataR01GM081680 · NIGMS · IOWA STATE UNIVERSITY · PI KLOCZKOWSKI, ANDRZEJ · 2007 to 2009
$763k
NIGMS NIH HHS R01 GM072014NIGMS NIH HHS R01GM072014NIGMS NIH HHS R01 GM073095NIGMS NIH HHS R01 GM081680NIGMS NIH HHS R01GM081680
6 · The paper itself

Abstract

Telomerases constitute a group of specialized ribonucleoprotein enzymes that remediate chromosomal shrinkage resulting from the "end-replication" problem. Defects in telomere length regulation are associated with several diseases as well as with aging and cancer. Despite significant progress in understanding the roles of telomerase, the complete structure of the human telomerase enzyme bound to telomeric DNA remains elusive, with the detailed molecular mechanism of telomere elongation still unknown. By application of computational methods for distant homology detection, comparative modeling, and molecular docking, guided by available experimental data, we have generated a three-dimensional structural model of a partial telomerase elongation complex composed of three essential protein domains bound to a single-stranded telomeric DNA sequence in the form of a heteroduplex with the template region of the human RNA subunit, TER. This model provides a structural mechanism for the processivity of telomerase and offers new insights into elongation. We conclude that the RNADNA heteroduplex is constrained by the telomerase TEN domain through repeated extension cycles and that the TEN domain controls the process by moving the template ahead one base at a time by translation and rotation of the double helix. The RNA region directly following the template can bind complementarily to the newly synthesized telomeric DNA, while the template itself is reused in the telomerase active site during the next reaction cycle. This first structural model of the human telomerase enzyme provides many details of the molecular mechanism of telomerase and immediately provides an important target for rational drug design.

Indexed as

Protein Structure, TertiaryAmino Acid SequenceBinding SitesCatalytic DomainComputer SimulationDNAHumansKineticsModels, MolecularMolecular Sequence DataNucleic Acid ConformationNucleic Acid HeteroduplexesPolymerizationProtein BindingProtein Structure, SecondaryRNADNANucleic Acid HeteroduplexesRNATelomerase

Identifiers

PMID21606328
PMCPMC3111281

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.