Evidence map›Paper›PMID 21606134›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA

Evaluating the utility of syndromic surveillance algorithms for screening to detect potentially clonal hospital infection outbreaks.

Randy J Carnevale, Thomas R Talbot, William Schaffner, Karen C Bloch, Titus L Daniels, Randolph A Miller

Abstract readComparative Study
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Clinical research informatics: a conceptual perspective.Journal of the American Medical Informatics Association : JAMIA · 2012
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Randy J CarnevaleDepartment of Biomedical Informatics, Vanderbilt University, Nashville, Tennessee, USA. randy.carnevale@vanderbilt.edu
Thomas R Talbot
William Schaffner
Karen C Bloch
Titus L Daniels
Randolph A Miller

Funding

Vanderbilt Biomedical Informatics Training ProgramT15LM007450 · NLM · VANDERBILT UNIVERSITY · PI Jessica S. Ancker, Bradley A. Malin · 2002 to 2026
$19.7M
TIME:(Tools for Inpatient Monitoring using Evidence)for Safe &AppropriateTestingR01LM007995 · NLM · VANDERBILT UNIVERSITY · PI MILLER, RANDOLPH A · 2004 to 2009
$2.1M
NLM NIH HHS 5R01-LM07995-06NLM NIH HHS R01 LM007995NLM NIH HHS T15 LM007450NLM NIH HHS T15 LM007450-08
6 · The paper itself

Abstract

objectiveThe authors evaluated algorithms commonly used in syndromic surveillance for use as screening tools to detect potentially clonal outbreaks for review by infection control practitioners.

designStudy phase 1 applied four aberrancy detection algorithms (CUSUM, EWMA, space-time scan statistic, and WSARE) to retrospective microbiologic culture data, producing a list of past candidate outbreak clusters. In phase 2, four infectious disease physicians categorized the phase 1 algorithm-identified clusters to ascertain algorithm performance. In phase 3, project members combined the algorithms to create a unified screening system and conducted a retrospective pilot evaluation. MEASUREMENTS: The study calculated recall and precision for each algorithm, and created precision-recall curves for various methods of combining the algorithms into a unified screening tool.

resultsIndividual algorithm recall and precision ranged from 0.21 to 0.31 and from 0.053 to 0.29, respectively. Few candidate outbreak clusters were identified by more than one algorithm. The best method of combining the algorithms yielded an area under the precision-recall curve of 0.553. The phase 3 combined system detected all infection control-confirmed outbreaks during the retrospective evaluation period. LIMITATIONS: Lack of phase 2 reviewers' agreement indicates that subjective expert review was an imperfect gold standard. Less conservative filtering of culture results and alternate parameter selection for each algorithm might have improved algorithm performance.

conclusionHospital outbreak detection presents different challenges than traditional syndromic surveillance. Nevertheless, algorithms developed for syndromic surveillance have potential to form the basis of a combined system that might perform clinically useful hospital outbreak screening.

Indexed as

AlgorithmsInfection ControlPattern Recognition, AutomatedBacterial InfectionsCells, CulturedCross InfectionDisease OutbreaksHumansPopulation SurveillanceReproducibility of ResultsRetrospective StudiesSensitivity and Specificity

Identifiers

PMID21606134
PMCPMC3128411

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.