Evidence map›Paper›PMID 21600196›Full record

ArticleDevelopmental biology2011

Growth factor-dependent branching of the ureteric bud is modulated by selective 6-O sulfation of heparan sulfate.

Mita M Shah, Hiroyuki Sakurai, Thomas F Gallegos, Derina E Sweeney, Kevin T Bush, Jeffrey D Esko, Sanjay K Nigam

Abstract read
In one paragraph

Article in Developmental biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Building branched tissue structures: from single cell guidance to coordinated construction.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  9. Review
  10. Regulation of kidney development by the Mdm2/Mdm4-p53 axis.Journal of molecular cell biology · 2017
    Review
  11. The function of heparan sulfate during branching morphogenesis.Matrix biology : journal of the International Society for Matrix Biology · 2017
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. The glomerular basement membrane as a model system to study the bioactivity of heparan sulfate glycosaminoglycans.Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Mita M ShahDepartment of Medicine (Division of Nephrology and Hypertension), University of California, San Diego, La Jolla, California 92093, USA.
Hiroyuki Sakurai
Thomas F Gallegos
Derina E Sweeney
Kevin T Bush
Jeffrey D Esko
Sanjay K Nigam
University of California San Diego · US

Funding

GENETIC CONTROL OF PROTEOGLYCAN METABOLISMR37GM033063 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 2000 to 2010
$3.9M
FACTORS MEDIATING URETERIC MIGRATION AND MORPHOGENESISR01DK057286 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIGAM, SANJAY K · 2000 to 2010
$3.7M
LIPID METABOLISM IN ANIMAL CELLSR01GM033063 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 1985 to 2019
$3.4M
Identification of Genes Regulating Ureter MorphogenesisR01DK065831 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIGAM, SANJAY K · 2004 to 2007
$1.5M
Mechanism of Fetal and Neonatal Handling of HIV DrugsR01DK079784 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIGAM, SANJAY K · 2008 to 2011
$1.5M
Structure and Function of 3-O-sulfation in Heparan SulfateR01GM093131 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 2010 to 2013
$1.2M
Heparan Sulfation and Kidney Branching MorphogenesisK08DK069324 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SHAH, MITA M · 2005 to 2009
$637k
NIDDK NIH HHS DK069324NIDDK NIH HHS DK57286NIDDK NIH HHS DK65831NIDDK NIH HHS DK79784NIDDK NIH HHS K08 DK069324NIDDK NIH HHS R01 DK057286NIDDK NIH HHS R01 DK065831NIDDK NIH HHS R01 DK079784NIGMS NIH HHS GM33063NIGMS NIH HHS R01 GM033063NIGMS NIH HHS R01 GM093131NIGMS NIH HHS R37 GM033063
6 · The paper itself

Abstract

Heparan sulfate proteoglycans (HSPGs) are found in the basement membrane and at the cell-surface where they modulate the binding and activity of a variety of growth factors and other molecules. Most of the functions of HSPGs are mediated by the variable sulfated glycosaminoglycan (GAG) chains attached to a core protein. Sulfation of the GAG chain is key as evidenced by the renal agenesis phenotype in mice deficient in the HS biosynthetic enzyme, heparan sulfate 2-O sulfotransferase (Hs2st; an enzyme which catalyzes the 2-O-sulfation of uronic acids in heparan sulfate). We have recently demonstrated that this phenotype is likely due to a defect in induction of the metanephric mesenchyme (MM), which along with the ureteric bud (UB), is responsible for the mutually inductive interactions in the developing kidney (Shah et al., 2010). Here, we sought to elucidate the role of variable HS sulfation in UB branching morphogenesis, particularly the role of 6-O sulfation. Endogenous HS was localized along the length of the UB suggesting a role in limiting growth factors and other molecules to specific regions of the UB. Treatment of cultures of whole embryonic kidney with variably desulfated heparin compounds indicated a requirement of 6O-sulfation in the growth and branching of the UB. In support of this notion, branching morphogenesis of the isolated UB was found to be more sensitive to the HS 6-O sulfation modification when compared to the 2-O sulfation modification. In addition, a variety of known UB branching morphogens (i.e., pleiotrophin, heregulin, FGF1 and GDNF) were found to have a higher affinity for 6-O sulfated heparin providing additional support for the notion that this HS modification is important for robust UB branching morphogenesis. Taken together with earlier studies, these findings suggest a general mechanism for spatio-temporal HS regulation of growth factor activity along the branching UB and in the developing MM and support the view that specific growth factor-HSPG interactions establish morphogen gradients and function as developmental switches during the stages of epithelial organogenesis (Shah et al., 2004).

Indexed as

AnimalsCarrier ProteinsCells, CulturedCytokinesFibroblast Growth Factor 1Glial Cell Line-Derived Neurotrophic FactorGrowth SubstancesHeparan SulfateKidneyMorphogenesisOrgan Culture TechniquesRatsRats, Sprague-DawleyUreterCarrier ProteinsCytokinesFibroblast Growth Factor 1Glial Cell Line-Derived Neurotrophic FactorGrowth SubstancesHeparan Sulfatepleiotrophin

Identifiers

PMID21600196
PMCPMC3130836
OpenAlexW2087848050

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.