Evidence map›Paper›PMID 21599215›Full record

ArticlePhysical review. E, Statistical, nonlinear, and soft matter physics2011

Mechanics of membrane bulging during cell-wall disruption in gram-negative bacteria.

Kristopher E Daly, Kerwyn Casey Huang, Ned S Wingreen, Ranjan Mukhopadhyay

Abstract read
In one paragraph

Article in Physical review. E, Statistical, nonlinear, and soft matter physics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Aberrant Membrane Structures in HypervesiculatingFrontiers in microbiology · 2021
    Article
  9. Article
  10. Article
  11. Electropermeabilization of nematode eggs for parasite deactivation.Journal of water, sanitation, and hygiene for development : a journal of the International Water Association · 2019
    Article
  12. Distribution of mechanical stress in the Escherichia coli cell envelope.Biochimica et biophysica acta. Biomembranes · 2018
    Article
  13. Review
  14. Article
  15. Critical cell wall hole size for lysis in Gram-positive bacteria.Journal of the Royal Society, Interface · 2013
    Article
  16. Article
  17. The molecular origins of chiral growth in walled cells.Current opinion in microbiology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Kristopher E DalyDepartment of Physics, Clark University, Worcester, Massachusetts 01610, USA.
Kerwyn Casey Huang
Ned S Wingreen
Ranjan Mukhopadhyay
Clark University · USPrinceton University · USStanford University · US

Funding

Engineering of cell shape and intracellular organizationDP2OD006466 · OD · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 2009 to 2009
$2.4M
Modeling Min-protein oscillations in bacteriaR01GM073186 · NIGMS · PRINCETON UNIVERSITY · PI WINGREEN, NED S · 2005 to 2008
$1.1M
Molecular Study of Min-Protein Polymer DynamicsK25GM075000 · NIGMS · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 2005 to 2009
$602k
NIGMS NIH HHS K25 GM075000NIGMS NIH HHS R01 GM073186NIH HHS DP2 OD006466NIH HHS DP2OD006466
6 · The paper itself

Abstract

The bacterial cell wall is a network of sugar strands crosslinked by peptides that serve as the primary structure for bearing osmotic stress. Despite its importance in cellular survival, the robustness of the cell wall to network defects has been relatively unexplored. Treatment of the gram-negative bacterium Escherichia coli with the antibiotic vancomycin, which disrupts the crosslinking of new material during growth, leads to the development of pronounced bulges and eventually of cell lysis. Here, we model the mechanics of the bulging of the cytoplasmic membrane through pores in the cell wall. We find that the membrane undergoes a transition between a nearly flat state and a spherical bulge at a critical pore radius of ~20 nm. This critical pore size is large compared to the typical distance between neighboring peptides and glycan strands, and hence pore size acts as a constraint on network integrity. We also discuss the general implications of our model to membrane deformations in eukaryotic blebbing and vesiculation in red blood cells.

Indexed as

Models, BiologicalCell MembraneComputer SimulationEscherichia coliMembrane Fluidity

Identifiers

PMID21599215
PMCPMC12380458
OpenAlexW2071905283

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.