Evidence map›Paper›PMID 21596569›Full record

ReviewTrends in biochemical sciences2011

Degrade, move, regroup: signaling control of splicing proteins.

Florian Heyd, Kristen W Lynch

Abstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Viral Modulation of Host Splicing.Annual review of virology · 2025
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Glycogen synthase kinase-3 and alternative splicing.Wiley interdisciplinary reviews. RNA · 2018
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Florian HeydDepartment of Biochemistry and Biophysics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104-6059, USA.
Kristen W Lynch

Funding

Mechanisms of Signal-Induced Alternative Splicing: CD45R01GM067719 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LYNCH, KRISTEN W · 2003 to 2015
$3.8M
Coordination of Inducible Alternative Splicing Networks in Human T CellsR01GM084034 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LYNCH, KRISTEN W · 2008 to 2011
$1.3M
NIGMS NIH HHS R01 GM067719NIGMS NIH HHS R01 GM084034
6 · The paper itself

Abstract

With recent advances in microarrays and sequencing it is now relatively straightforward to compare pre-mRNA splicing patterns in different cellular conditions on a genome-wide scale. Such studies have revealed extensive changes in cellular splicing programs in response to stimuli such as neuronal depolarization, DNA damage, immune signaling and cellular metabolic changes. However, for many years our understanding of the signaling pathways responsible for such splicing changes was greatly lacking. Excitingly, over the past few years this gap has begun to close. Recent studies now suggest notable trends in the mechanisms that link cellular stimuli to downstream alternative splicing events. These include regulated synthesis or degradation of splicing factors, differential protein-protein interactions, altered nuclear translocation and changes in transcription elongation.

Indexed as

Alternative SplicingChromosome StructuresProtein SplicingRNA-Binding ProteinsRNA Splice SitesRNA SplicingSignal TransductionRNA-Binding ProteinsRNA Splice Sites

Identifiers

PMID21596569
PMCPMC3155649

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.