Evidence map›Paper›PMID 21592988›Full record

ArticleThe Journal of infectious diseases2011

Influence of variations in CCL3L1 and CCR5 on tuberculosis in a northwestern Colombian population.

Manju Mamtani, Srinivas Mummidi, Veron Ramsuran, Minh-Hieu Pham, Robert Maldonado, Kazi Begum, Maria Soledad Valera, Racquel Sanchez, John Castiblanco, Hemant Kulkarni and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. Article
  7. Frontiers in immunology · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The immunological life cycle of tuberculosis.Nature reviews. Immunology · 2012
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

Manju MamtaniThe Veterans Administration Center for AIDS and HIV-1 infection and Center for Personalized Medicine, South Texas Veterans Health Care System and Department of Medicine, University of Texas Health Science Center, San Antonio, USA.
Srinivas Mummidi
Veron Ramsuran
Minh-Hieu Pham
Robert Maldonado
Kazi Begum
Maria Soledad Valera
Racquel Sanchez
John Castiblanco
Hemant Kulkarni
Thumbi Ndung'u
Weijing He
Juan Manuel Anaya
Sunil K Ahuja
South Texas Veterans Health Care System · USUniversity of KwaZulu-Natal · ZAUniversidad del Rosario · CO

Funding

Host Genetic Determinants of HIV PathogenesisR37AI046326 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI AHUJA, SUNIL K · 2005 to 2014
$7.8M
CCR5 REGULATION AND PROMOTER VARIANTS IN HIV1 INFECTIONR01AI043279 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI AHUJA, SUNIL K, MUMMIDI, SRINIVAS · 1998 to 2014
$3.6M
Transcriptional Mechanisms Regulating the HIV-1 coreceptor CCR5I01BX000975 · VA · SOUTH TEXAS VETERANS HEALTH CARE SYSTEM · PI MUMMIDI, SRINIVAS · 2011 to 2015
–
BLRD VA I01 BX000975NIAID NIH HHS R01 AI043279NIAID NIH HHS R37 AI046326PHS HHS R37046326
6 · The paper itself

Abstract

We investigated the association of polymorphisms in CCR5, the major human immunodeficiency virus (HIV)-1 coreceptor, and copy number of its potent ligand CCL3L1 with tuberculosis in 298 individuals from Colombia. The CCR5-HHD haplotype, a known genetic determinant of increased susceptibility to HIV-AIDS, and a high copy number of CCL3L1, a known genetic determinant of enhanced CCL3/CCL3L1 chemokine expression, each associated with presence of tuberculosis. Furthermore, CCR5-HHD was associated with higher CCR5 gene and surface expression. These results substantiate the strong link between the pro-inflammatory effects of CCR5 and its ligands with active tuberculosis and suggest that chemokine-chemokine receptor genetic determinants may influence tuberculosis in addition to HIV/AIDS.

Indexed as

AdultCase-Control StudiesChemokines, CCColombiaFemaleGene DosageHaplotypesHumansLinkage DisequilibriumLogistic ModelsMaleMiddle AgedPolymorphism, GeneticReceptors, CCR5TuberculosisCCL3L1 protein, humanChemokines, CCReceptors, CCR5

Identifiers

PMID21592988
PMCPMC3096789
OpenAlexW2147232303

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.