Evidence map›Paper›PMID 21586278›Full record

ArticleDevelopmental biology2011

Stage-dependent regulation of mammary ductal branching by heparan sulfate and HGF-cMet signaling.

Omai B Garner, Kevin T Bush, Kabir B Nigam, Yu Yamaguchi, Ding Xu, Jeffrey D Esko, Sanjay K Nigam

Abstract read
In one paragraph

Article in Developmental biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Mammary Organoids and 3D Cell Cultures: Old Dogs with New Tricks.Journal of mammary gland biology and neoplasia · 2020
    Review
  8. Cyclic Peptide-Based Biologics Regulating HGF-MET.International journal of molecular sciences · 2020
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. The function of heparan sulfate during branching morphogenesis.Matrix biology : journal of the International Society for Matrix Biology · 2017
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Omai B GarnerDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92093, USA.
Kevin T Bush
Kabir B Nigam
Yu Yamaguchi
Ding Xu
Jeffrey D Esko
Sanjay K Nigam
University of California San Diego · USSanford Burnham Prebys Medical Discovery Institute · US

Funding

Siglec Modulation of Inflammation in Humans and MiceP01HL057345 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MARTH, JAMEY · 1997 to 2012
$24.1M
GENETIC CONTROL OF PROTEOGLYCAN METABOLISMR37GM033063 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 2000 to 2010
$3.9M
FACTORS MEDIATING URETERIC MIGRATION AND MORPHOGENESISR01DK057286 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIGAM, SANJAY K · 2000 to 2010
$3.7M
LIPID METABOLISM IN ANIMAL CELLSR01GM033063 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 1985 to 2019
$3.4M
Systems Biology of Anionic Drug and Metabolite HandlingR01GM088824 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIGAM, SANJAY K · 2009 to 2012
$1.7M
Identification of Genes Regulating Ureter MorphogenesisR01DK065831 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIGAM, SANJAY K · 2004 to 2007
$1.5M
Mechanism of Fetal and Neonatal Handling of HIV DrugsR01DK079784 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIGAM, SANJAY K · 2008 to 2011
$1.5M
Gene Discovery and Heparan Sulfate BiogenesisR21HL098910 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D · 2010 to 2011
$431k
Minority Predoctoral Fellowship ProgramF31AI058916 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GARNER, OMAI B · 2004 to 2007
$120k
NHLBI NIH HHS HL57345NHLBI NIH HHS P01 HL057345NHLBI NIH HHS R21 HL098910NIAID NIH HHS AI058916NIAID NIH HHS F31 AI058916NIDDK NIH HHS DK57286NIDDK NIH HHS DK65831NIDDK NIH HHS DK79784NIDDK NIH HHS R01 DK057286NIDDK NIH HHS R01 DK065831NIDDK NIH HHS R01 DK079784NIGMS NIH HHS GM33063NIGMS NIH HHS R01 GM033063NIGMS NIH HHS R01 GM088824NIGMS NIH HHS R37 GM033063
6 · The paper itself

Abstract

Specific interactions of growth factors with heparan sulfate may function as "switches" to regulate stages of branching morphogenesis in developing mammalian organs, such as breast, lung, salivary gland and kidney, but the evidence derives mostly from studies of explanted tissues or cell culture (Shah et al., 2004). We recently provided in vivo evidence that inactivation of Ndst1, the predominant N-deacetylase/N-sulfotransferase gene essential for the formation of mature heparan sulfate, results in a highly specific defect in murine lobuloalveolar development (Crawford et al., 2010). Here, we demonstrate a highly penetrant dramatic defect in primary branching by mammary epithelial-specific inactivation of Ext1, a subunit of the copolymerase complex that catalyzes the formation of the heparan sulfate chain. In contrast to Ext1 deletion, inactivation of Hs2st (which encodes an enzyme required for 2-O-sulfation of uronic acids in heparan sulfate) did not inhibit ductal formation but displayed markedly decreased secondary and ductal side-branches as well as fewer bifurcated terminal end buds. Targeted conditional deletion of c-Met, the receptor for HGF, in mammary epithelial cells showed similar defects in secondary and ductal side-branching, but did not result in any apparent defect in bifurcation of terminal end buds. Although there is published evidence indicating a role for 2-O sulfation in HGF binding, primary epithelial cells isolated from Hs2st conditional deletions were able to activate Erk in the presence of HGF and there appeared to be only a slight reduction in HGF-mediated c-Met phosphorylation in these cells compared to control. Thus, both c-Met and Hs2st play important, but partly independent, roles in secondary and ductal side-branching. When considered together with previous studies of Ndst1-deficient glands, the data presented here raise the possibility of partially-independent regulation by heparan sulfate-dependent pathways of primary ductal branching, terminal end bud bifurcation, secondary branching, ductal side-branching and lobuloalveolar formation.

Indexed as

AnimalsCells, CulturedExostosin 1FemaleFibroblast Growth Factor 2Flow CytometryGene DeletionHeparan SulfateHepatocyte Growth FactorMammary Glands, AnimalMiceMice, TransgenicMorphogenesisN-AcetylglucosaminyltransferasesProto-Oncogene Proteins c-metSignal TransductionExostosin 1Fibroblast Growth Factor 2Heparan SulfateHepatocyte Growth FactorHGF protein, mouseN-AcetylglucosaminyltransferasesProto-Oncogene Proteins c-met

Identifiers

PMID21586278
PMCPMC3118867
OpenAlexW2046594654

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.