Evidence map›Paper›PMID 21576505›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2011

Mosaic HIV-1 Gag antigens can be processed and presented to human HIV-specific CD8+ T cells.

Zaza M Ndhlovu, Alicja Piechocka-Trocha, Seanna Vine, Ashley McMullen, Kegakilwe C Koofhethile, Phillip J R Goulder, Thumbi Ndung'u, Dan H Barouch, Bruce D Walker

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. New concepts in HIV-1 vaccine development.Current opinion in immunology · 2016
    Review
  9. Article
  10. Article
  11. Review
  12. Vaccine design: emerging concepts and renewed optimism.Current opinion in biotechnology · 2013
    Review
  13. Emerging targets and novel approaches to Ebola virus prophylaxis and treatment.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2013
    Review
  14. Article
  15. Article
  16. Review
  17. Is an HIV vaccine possible?Journal of acquired immune deficiency syndromes (1999) · 2012
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Zaza M NdhlovuRagon Institute of Massachusetts General Hospital, Massachusetts Institute of Technology and Harvard, Charlestown, MA 02129, USA.
Alicja Piechocka-Trocha
Seanna Vine
Ashley McMullen
Kegakilwe C Koofhethile
Phillip J R Goulder
Thumbi Ndung'u
Dan H Barouch
Bruce D Walker
Ragon Institute of MGH, MIT and Harvard · USUniversity of KwaZulu-Natal · ZABeth Israel Deaconess Medical Center · USHoward Hughes Medical Institute · USUniversity of Oxford · GB

Funding

The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ROBERT A. PARKER · 2004 to 2026
$94.4M
Preclinical Evaluation of Novel Adenovirus Prime-Boost HIV-1 VaccineU19AI078526 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI DOLIN, RAPHAEL · 2008 to 2012
$44.0M
Optimizing CD8+ T-cell responses against C clade HIV infection in subSaharan AfriR01AI046995 · NIAID · UNIVERSITY OF OXFORD · PI GOULDER, PHILIP J · 2000 to 2014
$6.8M
Pathogenesis of Clade C HIV InfectionR37AI067073 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI WALKER, BRUCE D · 2011 to 2020
$6.6M
INHIBITION OF HIV1 REPLICATION BY CYTOTOXIC LYMPHOCYTESR01AI030914 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI WALKER, BRUCE D · 1991 to 2013
$4.2M
Novel Adenovirus Vaccine Vectors for HIV/SIVR01AI066924 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI BAROUCH, DAN H. · 2006 to 2010
$3.5M
Immunoregulatory networks and HIV pathogenesisR01HL092565 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI KAUFMANN, DANIEL E · 2007 to 2015
$3.4M
Howard Hughes Medical InstituteNHLBI NIH HHS R01 HL092565NIAID NIH HHS AI066924NIAID NIH HHS AI078526NIAID NIH HHS P30 AI060354NIAID NIH HHS R01 AI030914NIAID NIH HHS R01 AI046995NIAID NIH HHS R37 AI067073PHS HHS R01 30914
6 · The paper itself

Abstract

Polyvalent mosaic HIV immunogens offer a potential solution for generating vaccines that can elicit immune responses against genetically diverse viruses. However, it is unclear whether key T cell epitopes can be processed and presented from these synthetic Ags and recognized by epitope-specific human T cells. In this study, we tested the ability of mosaic HIV immunogens expressed by recombinant, replication-incompetent adenovirus serotype 26 vectors to process and present major HIV clade B and clade C CD8 T cell epitopes in human cells. A bivalent mosaic vaccine expressing HIV Gag sequences was used to transduce PBMCs from 12 HIV-1-infected individuals from the United States and 10 HIV-1-infected individuals from South Africa; intracellular cytokine staining, together with tetramer staining, was used to assess the ability of mosaic Gag Ags to stimulate pre-existing memory responses compared with natural clade B and C vectors. Mosaic Gag Ags expressed all eight clade B epitopes tested in 12 United States subjects and all 5 clade C epitopes tested in 10 South African subjects. Overall, the magnitude of cytokine production induced by stimulation with mosaic Ags was comparable to clade B and clade C Ags tested, but the mosaic Ags elicited greater cross-clade recognition. Additionally, mosaic Ags induced HIV-specific CD4 T cell responses. Our studies demonstrate that mosaic Ags express major clade B and clade C viral T cell epitopes in human cells, as well as support the evaluation of mosaic HIV-1 vaccines in humans.

Indexed as

AdenoviridaeAIDS VaccinesAntigen PresentationCD8-Positive T-LymphocytesCross ReactionsGene Products, gagGenetic VectorsHIV-1HumansSouth AfricaSpecies SpecificityUnited StatesAIDS VaccinesGene Products, gag

Identifiers

PMID21576505
PMCPMC3129742
OpenAlexW2160141804

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.