Evidence map›Paper›PMID 21576497›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Agonist trapped in ATP-binding sites of the P2X2 receptor.

Ruotian Jiang, Damien Lemoine, Adeline Martz, Antoine Taly, Sophie Gonin, Lia Prado de Carvalho, Alexandre Specht, Thomas Grutter

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. P2X receptors.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Structural and molecular modeling features of P2X receptors.International journal of molecular sciences · 2014
    Review
  17. Optical control of trimeric P2X receptors and acid-sensing ion channels.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  18. Article
  19. Article
  20. Exploring the ATP-binding site of P2X receptors.Frontiers in cellular neuroscience · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ruotian JiangLaboratoire de Biophysicochimie des Récepteurs Canaux, Unité Mixte de Recherche 7199, Centre National de la Recherche Scientifique, Conception et Application de Molécules Bioactives, Faculté de Pharmacie, Université de Strasbourg, 67400 Illkirch, France.
Damien Lemoine
Adeline Martz
Antoine Taly
Sophie Gonin
Lia Prado de Carvalho
Alexandre Specht
Thomas Grutter
Centre National de la Recherche Scientifique · FRUniversité de Strasbourg · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ATP-gated P2X receptors are trimeric ion channels, as recently confirmed by X-ray crystallography. However, the structure was solved without ATP and even though extracellular intersubunit cavities surrounded by conserved amino acid residues previously shown to be important for ATP function were proposed to house ATP, the localization of the ATP sites remains elusive. Here we localize the ATP-binding sites by creating, through a proximity-dependent "tethering" reaction, covalent bonds between a synthesized ATP-derived thiol-reactive P2X2 agonist (NCS-ATP) and single cysteine mutants engineered in the putative binding cavities of the P2X2 receptor. By combining whole-cell and single-channel recordings, we report that NCS-ATP covalently and specifically labels two previously unidentified positions N140 and L186 from two adjacent subunits separated by about 18 Å in a P2X2 closed state homology model, suggesting the existence of at least two binding modes. Tethering reaction at both positions primes subsequent agonist binding, yet with distinct functional consequences. Labeling of one position impedes subsequent ATP function, which results in inefficient gating, whereas tethering of the other position, although failing to produce gating by itself, enhances subsequent ATP function. Our results thus define a large and dynamic intersubunit ATP-binding pocket and suggest that receptors trapped in covalently agonist-bound states differ in their ability to gate the ion channel.

Indexed as

Adenosine TriphosphateAmino Acid SequenceBinding SitesBiophysicsCell LineCell MembraneCysteineDNA, ComplementaryHumansLigandsModels, MolecularMolecular Sequence DataMutationPatch-Clamp TechniquesProtein BindingProtein ConformationAdenosine TriphosphateCysteineDNA, ComplementaryLigandsReceptors, Purinergic P2X2

Identifiers

PMID21576497
PMCPMC3107266
OpenAlexW1971535171

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.