Evidence map›Paper›PMID 21576228›Full record

ArticleNucleic acids research2011

An RNA aptamer perturbs heat shock transcription factor activity in Drosophila melanogaster.

H Hans Salamanca, Nicholas Fuda, Hua Shi, John T Lis

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. HSF1 Activation Mechanisms, Disease Roles, and Small Molecule Therapeutics.International journal of biological sciences · 2025
    Review
  2. Review
  3. Article
  4. HSF1 as a Cancer Biomarker and Therapeutic Target.Current cancer drug targets · 2019
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Selective aptamer-based control of intraneuronal signaling.Angewandte Chemie (International ed. in English) · 2015
    Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

H Hans SalamancaDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.
Nicholas Fuda
Hua Shi
John T Lis
University at Albany, State University of New York · USAlbany State University · USCornell University · US

Funding

COORDINATE GENE REGULATION IN ANIMAL CELLSR01GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN T · 1985 to 2020
$8.4M
COORDINATE GENE REGULATION IN ANIMAL CELLSR37GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN THOMAS · 1995 to 2004
$2.5M
Use of aptamers in dissecting the HSF-regulated cancer-enabling networkR01CA140730 · NCI · CORNELL UNIVERSITY · PI LIS, JOHN T, SHI, HUA · 2009 to 2012
$1.3M
NCI NIH HHS CA140730NCI NIH HHS R01 CA140730NIGMS NIH HHS GM25232NIGMS NIH HHS R01 GM025232
6 · The paper itself

Abstract

Heat shock transcription factor (HSF1) is a conserved master regulator that orchestrates the protection of normal cells from stress. However, HSF1 also protects abnormal cells and is required for carcinogenesis. Here, we generate an highly specific RNA aptamer (iaRNA(HSF1)) that binds Drosophila HSF1 and inhibits HSF1 binding to DNA. In Drosophila animals, iaRNA(HSF1) reduces normal Hsp83 levels and promotes developmental abnormalities, mimicking the spectrum of phenotypes that occur when Hsp83 activity is reduced. The HSF1 aptamer also effectively suppresses the abnormal growth phenotypes induced by constitutively active forms of the EGF receptor and Raf oncoproteins. Our results indicate that HSF1 contributes toward the morphological development of animal traits by controlling the expression of molecular chaperones under normal growth conditions. Additionally, our study demonstrates the utility of the RNA aptamer technology as a promising chemical genetic approach to investigate biological mechanisms, including cancer and for identifying effective drug targets in vivo.

Indexed as

AnimalsAptamers, NucleotideBase SequenceCells, CulturedDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsHeat-Shock ProteinsHeat-Shock ResponseHeat Shock Transcription FactorsMAP Kinase Signaling SystemMolecular Sequence DataMutationPhenotypeTranscription FactorsAptamers, NucleotideDNA-Binding ProteinsDrosophila ProteinsHeat-Shock ProteinsHeat Shock Transcription FactorsHsp83 protein, DrosophilaTranscription Factors

Identifiers

PMID21576228
PMCPMC3159435
OpenAlexW1992406521

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.