Evidence map›Paper›PMID 21575156›Full record

ArticleJournal of hematology & oncology2011

Gene expression profiles in BCL11B-siRNA treated malignant T cells.

Xin Huang, Qi Shen, Si Chen, Shaohua Chen, Lijian Yang, Jianyu Weng, Xin Du, Piotr Grabarczyk, Grzegorz K Przybylski, Christian A Schmidt and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of hematology & oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Novel targeted therapies of T cell lymphomas.Journal of hematology & oncology · 2020
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. The role of BCL11B in hematological malignancy.Experimental hematology & oncology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Xin HuangInstitute of Hematology, Medical College, Jinan University, Guangzhou, PR China. yangqiuli@hotmail.com
Qi Shen
Si Chen
Shaohua Chen
Lijian Yang
Jianyu Weng
Xin Du
Piotr Grabarczyk
Grzegorz K Przybylski
Christian A Schmidt
Yangqiu Li
Jinan University · CNUniversität Greifswald · DEGuangdong Academy of Medical Sciences · CNGuangdong General Hospital · CNInstitute of Human Genetics · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDownregulation of the B-cell chronic lymphocytic leukemia (CLL)/lymphoma11B (BCL11B) gene by small interfering RNA (siRNA) leads to growth inhibition and apoptosis of the human T-cell acute lymphoblastic leukemia (T-ALL) cell line Molt-4. To further characterize the molecular mechanism, a global gene expression profile of BCL11B-siRNA -treated Molt-4 cells was established. The expression profiles of several genes were further validated in the BCL11B-siRNA -treated Molt-4 cells and primary T-ALL cells.

results142 genes were found to be upregulated and 109 genes downregulated in the BCL11B-siRNA -treated Molt-4 cells by microarray analysis. Among apoptosis-related genes, three pro-apoptotic genes, TNFSF10, BIK, BNIP3, were upregulated and one anti-apoptotic gene, BCL2L1 was downregulated. Moreover, the expression of SPP1 and CREBBP genes involved in the transforming growth factor (TGF-β) pathway was down 16-fold. Expression levels of TNFSF10, BCL2L1, SPP1, and CREBBP were also examined by real-time PCR. A similar expression pattern of TNFSF10, BCL2L1, and SPP1 was identified. However, CREBBP was not downregulated in the BLC11B-siRNA -treated Molt-4 cells.

conclusionBCL11B-siRNA treatment altered expression profiles of TNFSF10, BCL2L1, and SPP1 in both Molt-4 T cell line and primary T-ALL cells.

Indexed as

Gene Expression Regulation, LeukemicAdultbcl-X ProteinCell Line, TumorChildCREB-Binding ProteinDown-RegulationFemaleGene Expression ProfilingHumansLeukemia, Lymphocytic, Chronic, B-CellMaleMiddle AgedPrecursor T-Cell Lymphoblastic Leukemia-LymphomaRepressor ProteinsRNA, Small InterferingBCL11B protein, humanBCL2L1 protein, humanbcl-X ProteinCREB-Binding ProteinCREBBP protein, humanRepressor ProteinsRNA, Small InterferingTNF-Related Apoptosis-Inducing LigandTNFSF10 protein, humanTumor Suppressor Proteins

Identifiers

PMID21575156
PMCPMC3113752
OpenAlexW2111467155

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.