Evidence map›Paper›PMID 21573956›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011

Towards an understanding of the nature of resistance to Phytophthora root rot in red raspberry.

J Graham, C A Hackett, K Smith, M Woodhead, K MacKenzie, I Tierney, D Cooke, M Bayer, N Jennings

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Fine Mapping of a Vigor QTL in Chickpea (Frontiers in plant science · 2022
    Article
  4. The genetics of vigour-related traits in chickpea (Cicer arietinum L.): insights from genomic data.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  5. Review
  6. Genetic and genomic resources forHorticulture research · 2019
    Review
  7. Article
  8. Mapping and expression of genes associated with raspberry fruit ripening and softening.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

J GrahamGenetics Department, Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, Scotland, UK. Julie.Graham@scri.ac.uk
C A Hackett
K Smith
M Woodhead
K MacKenzie
I Tierney
D Cooke
M Bayer
N Jennings
Crop Research Institute · CZBiomathematics and Statistics Scotland · GBJames Hutton Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A mapping population segregating for root rot resistance was screened under both field and glasshouse conditions over a number of seasons. Few correlations between field and glasshouse scores were significant. Final root rot scores were significantly negatively correlated with measures of root vigour. Two QTL associated with resistance were identified as were overlapping QTL for root vigour assessments. Markers significantly associated with the traits were used to identify BAC clones, which were subsequently sequenced to examine gene content. A number of genes were identified including those associated with stem cell identity, cell proliferation and elongation in the root zone, control of meristematic activity and organisation, cell signalling, stress response, sugar sensing and control of gene expression as well as a range of transcription factors including those known to be associated with defence. For marker-assisted breeding, the SSR marker Rub118b 110 bp allele from Latham was found in resistant germplasm but was not found in any of the susceptible germplasm tested.

Indexed as

Disease ResistanceAllelesChromosome MappingChromosomes, Artificial, BacterialChromosomes, PlantCloning, MolecularGenes, PlantGenetic LinkageGenotypePhytophthoraPlant DiseasesPlant ImmunityPlant RootsQuantitative Trait LociRosaceaeSequence Analysis, DNA

Identifiers

PMID21573956
OpenAlexW2024926607

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.