Evidence map›Paper›PMID 21572985›Full record

ArticlePLoS neglected tropical diseases2011

Population structure of Staphylococcus aureus from remote African Babongo Pygmies.

Frieder Schaumburg, Robin Köck, Alexander W Friedrich, Solange Soulanoudjingar, Ulysse Ateba Ngoa, Christof von Eiff, Saadou Issifou, Peter G Kremsner, Mathias Herrmann, Georg Peters and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 62 citations in OpenAlex.

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  7. A genomic infection control study forInfection and drug resistance · 2018
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  8. Frontiers in microbiology · 2018
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  15. Article
  16. Staphylococcus aureus nasal carriage among healthcare workers in Kisangani, the Democratic Republic of the Congo.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2015
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Frieder SchaumburgInstitute of Medical Microbiology, University of Münster, Münster, Germany. frieder.schaumburg@ukmuenster.de
Robin Köck
Alexander W Friedrich
Solange Soulanoudjingar
Ulysse Ateba Ngoa
Christof von Eiff
Saadou Issifou
Peter G Kremsner
Mathias Herrmann
Georg Peters
Karsten Becker
University of Münster · DEUniversity of Tübingen · DEAlbert Schweitzer Hospital · GAInstitute of Medical Microbiology and Hygiene · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPandemic community-acquired methicillin-resistant Staphylococcus aureus isolates (CA-MRSA) predominantly encode the Panton-Valentine leukocidin (PVL), which can be associated with severe infections. Reports from non-indigenous Sub-Saharan African populations revealed a high prevalence of PVL-positive isolates. The objective of our study was to investigate the S. aureus carriage among a remote indigenous African population and to determine the molecular characteristics of the isolates, particularly those that were PVL-positive. METHODOLOGY/PRINCIPAL

findingsNasal S. aureus carriage and risk factors of colonization were systematically assessed in remote Gabonese Babongo Pygmies. Susceptibility to antibiotics, possession of toxin-encoding genes (i.e., PVL, enterotoxins, and exfoliative toxins), S. aureus protein A (spa) types and multi-locus sequence types (MLST) were determined for each isolate. The carriage rate was 33%. No MRSA was detected, 61.8% of the isolates were susceptible to penicillin. Genes encoding PVL (55.9%), enterotoxin B (20.6%), exfoliative toxin D (11.7%) and the epidermal cell differentiation inhibitor B (11.7%) were highly prevalent. Thirteen spa types were detected and were associated with 10 STs predominated by ST15, ST30, ST72, ST80, and ST88.

conclusionsThe high prevalence of PVL-positive isolates among Babongo Pygmies demands our attention as PVL can be associated with necrotinzing infection and may increase the risk of severe infections in remote Pygmy populations. Many S. aureus isolates from Babongo Pygmies and pandemic CA-MRSA-clones have a common genetic background. Surveillance is needed to control the development of resistance to antibiotic drugs and to assess the impact of the high prevalence of PVL in indigenous populations.

Indexed as

AdolescentAdultAfrica South of the SaharaAgedAged, 80 and overAnti-Bacterial AgentsBacterial Typing TechniquesCarrier StateChildChild, PreschoolDNA, BacterialFemaleGenotypeHumansInfantInfant, NewbornAnti-Bacterial AgentsDNA, BacterialVirulence Factors

Identifiers

PMID21572985
PMCPMC3091839
OpenAlexW2091191566

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.