Evidence map›Paper›PMID 21572431›Full record

ArticleNature immunology2011

The transcription factor BATF controls the global regulators of class-switch recombination in both B cells and T cells.

Wataru Ise, Masako Kohyama, Barbara U Schraml, Tingting Zhang, Bjoern Schwer, Uttiya Basu, Frederick W Alt, Jun Tang, Eugene M Oltz, Theresa L Murphy and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 234 papers.

0numbers the graph read from it
0cells of the map it votes in
234citing papers in PubMed
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

234 citing papers in PubMed, 373 citations in OpenAlex.

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  13. How Cytokines Regulate Immune Response Toward Chronic Allograft Rejection?Results and problems in cell differentiation · 2026
    Review
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  20. Article

174 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Wataru IseDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Masako Kohyama
Barbara U Schraml
Tingting Zhang
Bjoern Schwer
Uttiya Basu
Frederick W Alt
Jun Tang
Eugene M Oltz
Theresa L Murphy
Kenneth M Murphy
Washington University in St. Louis · USHoward Hughes Medical Institute · USBoston Children's Hospital · US

Funding

ANALYSIS OF BIDIRECTIONAL SIGNALING MECHANISMS FOR BTLA AND HVEM IN AUTOIMMUNITYR01AI076427 · NIAID · WASHINGTON UNIVERSITY · PI MURPHY, KENNETH M · 2009 to 2010
$691k
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI076427
6 · The paper itself

Abstract

The transcription factor BATF controls the differentiation of interleukin 17 (IL-17)-producing helper T cells (T(H)17 cells) by regulating expression of the transcription factor RORγt itself and RORγt target genes such as Il17. Here we report the mechanism by which BATF controls in vivo class-switch recombination (CSR). In T cells, BATF directly controlled expression of the transcription factors Bcl-6 and c-Maf, both of which are needed for development of follicular helper T cells (T(FH) cells). Restoring T(FH) cell activity to Batf(-/-) T cells in vivo required coexpression of Bcl-6 and c-Maf. In B cells, BATF directly controlled the expression of both activation-induced cytidine deaminase (AID) and of germline transcripts of the intervening heavy-chain region and constant heavy-chain region (I(H)-C(H)). Thus, BATF functions at multiple hierarchical levels in two cell types to globally regulate switched antibody responses in vivo.

Indexed as

Adaptor Proteins, Signal TransducingAICDA (Activation-Induced Cytidine Deaminase)AnimalsBasic-Leucine Zipper Transcription FactorsB-LymphocytesCarrier ProteinsCD40 LigandCells, CulturedCytidine DeaminaseFemaleFlow CytometryGene Expression ProfilingGerminal CenterImmunoglobulin Class SwitchingLymphocyte ActivationMaleAdaptor Proteins, Signal TransducingAICDA (Activation-Induced Cytidine Deaminase)Basic-Leucine Zipper Transcription FactorsBatf protein, mouseCarrier ProteinsCD40 LigandCmip protein, mouseCytidine DeaminaseProto-Oncogene Proteins c-bcl-6

Identifiers

PMID21572431
PMCPMC3117275
OpenAlexW2076236096

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.