Evidence map›Paper›PMID 21572039›Full record

ArticleThe Journal of biological chemistry2011

Structure of surface layer homology (SLH) domains from Bacillus anthracis surface array protein.

Justin Kern, Rosemarie Wilton, Rongguang Zhang, T Andrew Binkowski, Andrzej Joachimiak, Olaf Schneewind

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
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  11. A multidomain connector links the outer membrane and cell wall in phylogenetically deep-branching bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. TheMicroorganisms · 2020
    Review
  18. Structural insights into the main S-layer unit ofThe Journal of biological chemistry · 2020
    Article
  19. Article
  20. Pyruvate Substitutions on Glycoconjugates.International journal of molecular sciences · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Justin KernDepartment of Microbiology, University of Chicago, Chicago, Illinois 60637, USA.
Rosemarie Wilton
Rongguang Zhang
T Andrew Binkowski
Andrzej Joachimiak
Olaf Schneewind
University of Chicago · USArgonne National Laboratory · USJoint Center for Structural Genomics · US

Funding

Vaccines and Therapies Against BotulismU54AI057153 · NIAID · UNIVERSITY OF CHICAGO · PI SHUMAN, HOWARD A · 2003 to 2013
$87.6M
The Midwest Center for Structural GenomicsU54GM074942 · NIGMS · UNIVERSITY OF CHICAGO · PI JOACHIMIAK, ANDRZEJ · 2005 to 2009
$51.0M
Midwest Center for Structural GenomicsU54GM094585 · NIGMS · UNIVERSITY OF CHICAGO · PI MINOR, WLADEK · 2010 to 2014
$33.7M
Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
Surface Proteins of Bacillus anthracisR01AI069227 · NIAID · UNIVERSITY OF CHICAGO · PI Dominique Missiakas · 2007 to 2026
$6.5M
NIAID NIH HHS 1-U54-AI-057153NIAID NIH HHS AI69227NIAID NIH HHS R01 AI069227NIGMS NIH HHS GM007183NIGMS NIH HHS GM074942NIGMS NIH HHS U54 GM074942NIGMS NIH HHS U54 GM094585
6 · The paper itself

Abstract

Surface (S)-layers, para-crystalline arrays of protein, are deposited in the envelope of most bacterial species. These surface organelles are retained in the bacterial envelope through the non-covalent association of proteins with cell wall carbohydrates. Bacillus anthracis, a Gram-positive pathogen, produces S-layers of the protein Sap, which uses three consecutive repeats of the surface-layer homology (SLH) domain to engage secondary cell wall polysaccharides (SCWP). Using x-ray crystallography, we reveal here the structure of these SLH domains, which assume the shape of a three-prong spindle. Each SLH domain contributes to a three-helical bundle at the spindle base, whereas another α-helix and its connecting loops generate the three prongs. The inter-prong grooves contain conserved cationic and anionic residues, which are necessary for SLH domains to bind the B. anthracis SCWP. Modeling experiments suggest that the SLH domains of other S-layer proteins also fold into three-prong spindles and capture bacterial envelope carbohydrates by a similar mechanism.

Indexed as

Bacillus anthracisSequence Homology, Amino AcidAmino Acid SequenceBacterial ProteinsCrystallography, X-RayMembrane GlycoproteinsModels, MolecularMolecular Sequence DataPolysaccharides, BacterialProtein Structure, TertiaryBacterial ProteinsMembrane GlycoproteinsPolysaccharides, BacterialS-layer proteins

Identifiers

PMID21572039
PMCPMC3138252
OpenAlexW2085536363

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.