Evidence map›Paper›PMID 21572029›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2011

Proteasomes, TAP, and endoplasmic reticulum-associated aminopeptidase associated with antigen processing control CD4+ Th cell responses by regulating indirect presentation of MHC class II-restricted cytoplasmic antigens.

Srdjan M Dragovic, Timothy Hill, Gregory J Christianson, Sungjune Kim, Tim Elliott, Diane Scott, Derry C Roopenian, Luc Van Kaer, Sebastian Joyce

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Associations betweenBioMed research international · 2021
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Pathways of antigen processing.Annual review of immunology · 2013
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Srdjan M DragovicDepartment of Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN 37232-2363, USA.
Timothy Hill
Gregory J Christianson
Sungjune Kim
Tim Elliott
Diane Scott
Derry C Roopenian
Luc Van Kaer
Sebastian Joyce
Vanderbilt University · USJackson Laboratory · USImperial College London · GBUniversity of Southampton · GB

Funding

YOHIMBINE AS A MODEL OF ORTHOSTATIC INTOLERANCEM01RR000095 · NCRR · VANDERBILT UNIVERSITY · PI DRAKE, WONDER P. · 1985 to 2008
$38.3M
MOLECULAR IMMUNOLOGY OF MINOR HISTOCOMPATIBILITY ANTIGENR01HL054977 · NHLBI · VANDERBILT UNIVERSITY · PI JOYCE, SEBASTIAN · 1995 to 2009
$2.6M
NON H-2 HISTOCOMPATIBILITY GENES AND ANTIGENSR01AI028802 · NIAID · JACKSON LABORATORY · PI ROOPENIAN, DERRY CHARLES · 1990 to 2007
$2.1M
Mechanisms and consequences of iNKT cell anergyR01AI070305 · NIAID · VANDERBILT UNIVERSITY · PI VAN KAER, LUC · 2007 to 2011
$1.9M
Processing and Presentation of Minor Histocompatibility Antigens that Cause GvHDR01HL121139 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI JOYCE, SEBASTIAN · 2014 to 2017
$1.6M
Modulation of chronic vascular inflammation by iNKT cellsR01HL089667 · NHLBI · VANDERBILT UNIVERSITY · PI VAN KAER, LUC · 2009 to 2012
$1.5M
NCRR NIH HHS M01 RR000095NHLBI NIH HHS HL54977NHLBI NIH HHS HL89667NHLBI NIH HHS R01 HL054977NHLBI NIH HHS R01 HL089667NHLBI NIH HHS R01 HL121139NIAID NIH HHS AI28802NIAID NIH HHS AI40079NIAID NIH HHS AI70305NIAID NIH HHS N01 AI040079NIAID NIH HHS R01 AI028802NIAID NIH HHS R01 AI070305
6 · The paper itself

Abstract

Cytoplasmic Ags derived from viruses, cytosolic bacteria, tumors, and allografts are presented to T cells by MHC class I or class II molecules. In the case of class II-restricted Ags, professional APCs acquire them during uptake of dead class II-negative cells and present them via a process called indirect presentation. It is generally assumed that the cytosolic Ag-processing machinery, which supplies peptides for presentation by class I molecules, plays very little role in indirect presentation of class II-restricted cytoplasmic Ags. Remarkably, upon testing this assumption, we found that proteasomes, TAP, and endoplasmic reticulum-associated aminopeptidase associated with Ag processing, but not tapasin, partially destroyed or removed cytoplasmic class II-restricted Ags, such that their inhibition or deficiency led to dramatically increased Th cell responses to allograft (HY) and microbial (Listeria monocytogenes) Ags, both of which are indirectly presented. This effect was neither due to enhanced endoplasmic reticulum-associated degradation nor competition for Ag between class I and class II molecules. From these findings, a novel model emerged in which the cytosolic Ag-processing machinery regulates the quantity of cytoplasmic peptides available for presentation by class II molecules and, hence, modulates Th cell responses.

Indexed as

AminopeptidasesAntigen PresentationAntigens, BacterialATP-Binding Cassette TransportersCytoplasmEndoplasmic ReticulumHistocompatibility Antigens Class IIListeria monocytogenesProteasome Endopeptidase ComplexT-Lymphocytes, Helper-InducerTransplantation, HomologousAminopeptidasesAntigens, BacterialATP-Binding Cassette TransportersHistocompatibility Antigens Class IIProteasome Endopeptidase Complextransporter associated with antigen processing (TAP)

Identifiers

PMID21572029
PMCPMC3537507
OpenAlexW2107554173

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.