Evidence map›Paper›PMID 21571879›Full record

ArticleApplied and environmental microbiology2011

Unsuspected diversity of arsenite-oxidizing bacteria as revealed by widespread distribution of the aoxB gene in prokaryotes.

Audrey Heinrich-Salmeron, Audrey Cordi, Céline Brochier-Armanet, David Halter, Christophe Pagnout, Elham Abbaszadeh-fard, Didier Montaut, Fabienne Seby, Philippe N Bertin, Pascale Bauda and 1 more

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 86 citations in OpenAlex.

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  11. Diversity and Niche of Archaea in Bioremediation.Archaea (Vancouver, B.C.) · 2018
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  20. Environmental microbiology as a mosaic of explored ecosystems and issues.Environmental science and pollution research international · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Audrey Heinrich-SalmeronLaboratoire de Génétique Moléculaire, Génomique, Microbiologie, Département Microorganismes, Génomes, Environnement, UMR7156 Université de Strasbourg/CNRS, 28 Rue Goethe, 67083 Strasbourg Cedex, France.
Audrey Cordi
Céline Brochier-Armanet
David Halter
Christophe Pagnout
Elham Abbaszadeh-fard
Didier Montaut
Fabienne Seby
Philippe N Bertin
Pascale Bauda
Florence Arsène-Ploetze
Centre National de la Recherche Scientifique · FRUniversité de Pau et des Pays de l'Adour · FRGénétique Moléculaire Génomique Microbiologie · FRInstitut de Microbiologie de la Méditerranée · FRUniversité de Strasbourg · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, new strains were isolated from an environment with elevated arsenic levels, Sainte-Marie-aux-Mines (France), and the diversity of aoxB genes encoding the arsenite oxidase large subunit was investigated. The distribution of bacterial aoxB genes is wider than what was previously thought. AoxB subfamilies characterized by specific signatures were identified. An exhaustive analysis of AoxB sequences from this study and from public databases shows that horizontal gene transfer has likely played a role in the spreading of aoxB in prokaryotic communities.

Indexed as

Environmental MicrobiologyArchaeaArsenitesBacteriaCluster AnalysisDNA, ArchaealDNA, BacterialFranceMolecular Sequence DataOxidation-ReductionOxidoreductasesPhylogenySequence Analysis, DNASequence Homologyarsenitearsenite oxidaseArsenitesDNA, ArchaealDNA, BacterialOxidoreductases

Identifiers

PMID21571879
PMCPMC3127681
OpenAlexW1974287729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.