Evidence map›Paper›PMID 21571218›Full record

ArticleDevelopmental cell2011

Genome-wide analysis of simultaneous GATA1/2, RUNX1, FLI1, and SCL binding in megakaryocytes identifies hematopoietic regulators.

Marloes R Tijssen, Ana Cvejic, Anagha Joshi, Rebecca L Hannah, Rita Ferreira, Ariel Forrai, Dana C Bellissimo, S Helen Oram, Peter A Smethurst, Nicola K Wilson and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Developmental cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 181 papers.

0numbers the graph read from it
0cells of the map it votes in
181citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

181 citing papers in PubMed, 280 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
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  7. Review
  8. Article
  9. Production of plateletsHaematologica · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. FLI1 and GATA1 governHaematologica · 2025
    Article
  14. Article
  15. Article
  16. Studying the Role of HOX Genes in Thrombocyte Development.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Article

121 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Marloes R TijssenDepartment of Haematology, Cambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, UK.
Ana Cvejic
Anagha Joshi
Rebecca L Hannah
Rita Ferreira
Ariel Forrai
Dana C Bellissimo
S Helen Oram
Peter A Smethurst
Nicola K Wilson
Xiaonan Wang
Katrin Ottersbach
Derek L Stemple
Anthony R Green
Willem H Ouwehand
Berthold Göttgens
University of Cambridge · GBNHS Blood and Transplant · GBWellcome Sanger Institute · GB

Funding

British Heart Foundation RG/09/012/28096Medical Research Council G0800784Medical Research Council G0900951Medical Research Council G0900951(91754)National Centre for the Replacement, Refinement and Reduction of Animals in Research G0900729/1Wellcome TrustWellcome Trust 077037/Z/05/ZWellcome Trust 077047/Z/05/ZWellcome Trust 082597/Z/07/Z
6 · The paper itself

Abstract

Hematopoietic differentiation critically depends on combinations of transcriptional regulators controlling the development of individual lineages. Here, we report the genome-wide binding sites for the five key hematopoietic transcription factors--GATA1, GATA2, RUNX1, FLI1, and TAL1/SCL--in primary human megakaryocytes. Statistical analysis of the 17,263 regions bound by at least one factor demonstrated that simultaneous binding by all five factors was the most enriched pattern and often occurred near known hematopoietic regulators. Eight genes not previously appreciated to function in hematopoiesis that were bound by all five factors were shown to be essential for thrombocyte and/or erythroid development in zebrafish. Moreover, one of these genes encoding the PDZK1IP1 protein shared transcriptional enhancer elements with the blood stem cell regulator TAL1/SCL. Multifactor ChIP-Seq analysis in primary human cells coupled with a high-throughput in vivo perturbation screen therefore offers a powerful strategy to identify essential regulators of complex mammalian differentiation processes.

Indexed as

Basic Helix-Loop-Helix ProteinsBinding SitesCell DifferentiationCells, CulturedCore Binding Factor Alpha 2 SubunitGATA1 Transcription FactorGATA2 Transcription FactorGenome, HumanHumansMegakaryocytesOligonucleotide Array Sequence AnalysisProto-Oncogene Protein c-fli-1Proto-Oncogene ProteinsT-Cell Acute Lymphocytic Leukemia Protein 1Basic Helix-Loop-Helix ProteinsCore Binding Factor Alpha 2 SubunitFLI1 protein, humanGATA1 protein, humanGATA1 Transcription FactorGATA2 protein, humanGATA2 Transcription FactorProto-Oncogene Protein c-fli-1Proto-Oncogene ProteinsRUNX1 protein, humanTAL1 protein, humanT-Cell Acute Lymphocytic Leukemia Protein 1

Identifiers

PMID21571218
PMCPMC3145975
OpenAlexW2165397654

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.