Evidence map›Paper›PMID 21570461›Full record

ArticleToxicology in vitro : an international journal published in association with BIBRA2011

Differential regulation of polysome mRNA levels in mouse Hepa-1C1C7 cells exposed to dioxin.

Jessica A Thornley, Heidi W Trask, Christian J A Ridley, Murray Korc, Jiang Gui, Carol S Ringelberg, Sinny Wang, Craig R Tomlinson

Open access · greenAbstract read
In one paragraph

Article in Toxicology in vitro : an international journal published in association with BIBRA, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Jessica A ThornleyNorris Cotton Cancer Center, Dartmouth Hitchcock Medical Center, Lebanon, NH 03756, USA.
Heidi W Trask
Christian J A Ridley
Murray Korc
Jiang Gui
Carol S Ringelberg
Sinny Wang
Craig R Tomlinson
Dartmouth–Hitchcock Medical Center · USUniversity of Bath · GB

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Steven D Leach · 1985 to 2026
$91.3M
Novel aspects of Epithelial-Mesenchymal Transition(EMT)in pancreatic cancerR01CA075059 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI KORC, MURRAY · 1997 to 2018
$4.3M
Role of fetal TCDD-activited AHR in adult heart diseaseR21ES013827 · NIEHS · UNIVERSITY OF CINCINNATI · PI TOMLINSON, CRAIG R · 2005 to 2008
$417k
NCI NIH HHS P30 CA023108NCI NIH HHS R01 CA075059NIEHS NIH HHS R21 ES013827NIEHS NIH HHS R21ES013827
6 · The paper itself

Abstract

The environmental agent 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD or dioxin) causes a multitude of human illnesses. In order to more fully understand the underlying biology of TCDD toxicity, we tested the hypothesis that new candidate genes could be identified using polysome RNA from TCDD-treated mouse Hepa-1c1c7 cells. We found that (i) differentially expressed whole cell and cytoplasm RNA levels are both poor predictors of polysome RNA levels; (ii) for a majority of RNAs, differential RNA levels are regulated independently in the nucleus, cytoplasm, and polysomes; (iii) for the remaining polysome RNAs, levels are regulated via several different mechanisms, including a "tagging" of mRNAs in the nucleus for immediate polysome entry; and (iv) most importantly, a gene list derived from differentially expressed polysome RNA generated new genes and cell pathways potentially related to TCDD biology.

Indexed as

AnimalsCell LineCell Line, TumorGene Expression ProfilingGene Expression RegulationHepatocytesMiceOligonucleotide Array Sequence AnalysisPolychlorinated DibenzodioxinsPolyribosomesRNA, Messenger1,2,7,8-tetrachlorodibenzo-p-dioxinPolychlorinated DibenzodioxinsRNA, Messenger

Identifiers

PMID21570461
PMCPMC3162130
OpenAlexW2002646397

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.