Evidence map›Paper›PMID 21567938›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2011

Semi-automated scoring of triple-probe FISH in human sperm: methods and further validation.

Melissa J Perry, Xing Chen, Megan E McAuliffe, Arnab Maity, Glen M Deloid

Registry-linked trialAbstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00011713 (Human Exposure to Bisphenol A, Phthalates and Fertility, Pregnancy Outcomes.), which is not on this map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00011713 completednot on this map

Human Exposure to Bisphenol A, Phthalates and Fertility, Pregnancy Outcomes.

TypeobservationalSponsorNational Institute of Environmental Health Sciences (NIEHS)Ran1999 to 2020Enrolled1,474ConditionsInfertilityArmsCompletion questionnaires/providing biological samples
3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Pesticide interactions and risks of sperm chromosomal abnormalities.International journal of hygiene and environmental health · 2019
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Melissa J PerryDepartment of Environmental and Occupational Health, The George Washington University School of Public Health and Health Services, Washington, DC 20037, USA. melissa.perry@gwumc.edu
Xing Chen
Megan E McAuliffe
Arnab Maity
Glen M Deloid

Funding

Translational Research Support CoreP30ES000002 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI Marc G Weisskopf · 1985 to 2026
$44.6M
PCBs, Phthalates and Male Reproductive HealthR01ES009718 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI HAUSER, RUSS B · 1999 to 2018
$11.6M
Statistical Methods for Analysis of High-Dimensional Gene and Environment DataR00ES017744 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MAITY, ARNAB · 2011 to 2013
$663k
Molecular Epidemiology of Atrazine's Hormonal EffectsK01ES010959 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI PERRY, MELISSA · 2001 to 2005
$586k
NIEHS NIH HHS K01 ES010959NIEHS NIH HHS KO1ES10959NIEHS NIH HHS P30 ES000002NIEHS NIH HHS P30ES000002NIEHS NIH HHS R00 ES017744NIEHS NIH HHS R01 ES009718NIEHS NIH HHS R01ES09718NIOSH CDC HHS T42 OH008416
6 · The paper itself

Abstract

Although the frequency and consequence of sperm chromosomal abnormalities are considerable, few epidemiologic studies in large samples have been conducted to investigate etiologic risk factors. This is, in part, attributable to the labor intensive demands of manual sperm fluorescence in situ hybridization (FISH) scoring. As part of an epidemiologic study investigating environmental risk factors for aneuploidy among men attending a hospital-based fertility clinic, a semi-automated method of slide scoring was further validated and used to estimate sex chromosome sperm disomy frequency in a large number of samples. Multiprobe FISH for chromosomes X, Y, and 18 was used to determine sex chromosome disomy in sperm nuclei. Semi-automated scoring methods were used to quantify X disomy (sperm FISH genotype XX18), Y disomy (YY18), and XY disomy (XY18). The semi-automated results were compared with the results from manual scoring in 10 slides. The semi-automated method was then used to estimate sex chromosome disomy frequency in 60 men. Of 10 slides scored, significant differences between the manual and semi-automated results were seen primarily in one slide that was of poor quality because of over swollen nuclei. Among 60 men analyzed using the semi-automated method, median total sex chromosome disomy frequency was 1.65%, which is higher than seen among normal men but within range with reports from fertility clinic populations. These results further validate that semi-automated methods can be used to score sperm disomy with results comparable to manual methods. This is the largest study to date to provide estimates of sex chromosome disomy among men attending fertility clinics. These methods should be replicated in larger clinic populations to arrive at stable estimates of aneuploidy frequency in men who are members of subfertile couples. © 2011 International Society for Advancement of Cytometry.

Indexed as

AneuploidySex Chromosome AberrationsAdolescentAdultChromosomes, Human, Pair 18Chromosomes, Human, XChromosomes, Human, YHumansIn Situ Hybridization, FluorescenceMaleMiddle AgedSpermatozoaUniparental Disomy

Identifiers

PMID21567938
PMCPMC3349235

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.