Evidence map›Paper›PMID 21564556›Full record

ArticleChemical biology & drug design2011

Targeting metalloproteins by fragment-based lead discovery.

Sherida Johnson, Elisa Barile, Biancamaria Farina, Angela Purves, Jun Wei, Li-Hsing Chen, Sergey Shiryaev, Ziming Zhang, Irina Rodionova, Arpita Agrawal and 4 more

Abstract read
In one paragraph

Article in Chemical biology & drug design, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Sherida JohnsonSanford-Burnham Medical Research Institute, 10901 N. Torrey Pines Rd., La Jolla, CA 92037, USA.
Elisa Barile
Biancamaria Farina
Angela Purves
Jun Wei
Li-Hsing Chen
Sergey Shiryaev
Ziming Zhang
Irina Rodionova
Arpita Agrawal
Seth M Cohen
Andrei Osterman
Alex Strongin
Maurizio Pellecchia
Sanford Burnham Prebys Medical Discovery Institute · USUniversity of California, San Diego · US

Funding

Development of an effective therapy against post-exposure AnthraxU01AI070494 · NIAID · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI PELLECCHIA, MAURIZIO · 2006 to 2010
$5.1M
METALLOPROTEINASES IN TUMOR NEOVASCULARIZATIONR01CA083017 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI STRONGIN, ALEX Y · 1999 to 2014
$3.8M
Potent and Safe Inhibitors of B. anthracis Lethal FactorR01AI059572 · NIAID · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI PELLECCHIA, MAURIZIO · 2006 to 2009
$2.5M
NCI NIH HHS CA083017NCI NIH HHS R01 CA083017NIAID NIH HHS AI059572NIAID NIH HHS AI070494NIAID NIH HHS R01 AI059572NIAID NIH HHS U01 AI070494
6 · The paper itself

Abstract

It has been estimated that nearly one-third of functional proteins contain a metal ion. These constitute a wide variety of possible drug targets including metalloproteinases, dehydrogenases, oxidoreductases, hydrolases, deacetylases, or many others in which the metal ion is either of catalytic or of structural nature. Despite the predominant role of a metal ion in so many classes of drug targets, current high-throughput screening techniques do not usually produce viable hits against these proteins, likely due to the lack of proper metal-binding pharmacophores in the current screening libraries. Herein, we describe a novel fragment-based drug discovery approach using a metal-targeting fragment library that is based on a variety of distinct classes of metal-binding groups designed to reliably anchor the fragments at the target's metal ions. We show that the approach can effectively identify novel, potent and selective agents that can be readily developed into metalloprotein-targeted therapeutics.

Indexed as

Drug Delivery SystemsAnimalsCells, CulturedCoordination ComplexesInhibitory Concentration 50MetalloproteinsMiceMolecular StructurePeptide FragmentsSmall Molecule LibrariesZincCoordination ComplexesMetalloproteinsPeptide FragmentsSmall Molecule LibrariesZinc

Identifiers

PMID21564556
PMCPMC3135788
OpenAlexW1504306840

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.