Evidence map›Paper›PMID 21561864›Full record

ArticleThe Journal of biological chemistry2011

Disulfide-stabilized helical hairpin structure and activity of a novel antifungal peptide EcAMP1 from seeds of barnyard grass (Echinochloa crus-galli).

Svetlana B Nolde, Alexander A Vassilevski, Eugene A Rogozhin, Nikolay A Barinov, Tamara A Balashova, Olga V Samsonova, Yuri V Baranov, Alexey V Feofanov, Tsezi A Egorov, Alexander S Arseniev and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 103 citations in OpenAlex.

  1. Review
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  8. Antifungal peptides from living organisms.Frontiers in microbiology · 2024
    Review
  9. Review
  10. Food Allergens of Plant Origin.Foods (Basel, Switzerland) · 2023
    Review
  11. Review
  12. Article
  13. Article
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  15. Article
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  17. Article
  18. Identification of the amino-terminal fragment of Ara h 1 as a major target of the IgE-binding activity in the basic peanut protein fraction.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2020
    Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Svetlana B NoldeM.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, 117997 Moscow, Russian Federation.
Alexander A Vassilevski
Eugene A Rogozhin
Nikolay A Barinov
Tamara A Balashova
Olga V Samsonova
Yuri V Baranov
Alexey V Feofanov
Tsezi A Egorov
Alexander S Arseniev
Eugene V Grishin
Institute of Bioorganic Chemistry · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study presents purification, activity characterization, and (1)H NMR study of the novel antifungal peptide EcAMP1 from kernels of barnyard grass Echinochloa crus-galli. The peptide adopts a disulfide-stabilized α-helical hairpin structure in aqueous solution and thus represents a novel fold among naturally occurring antimicrobial peptides. Micromolar concentrations of EcAMP1 were shown to inhibit growth of several fungal phytopathogens. Confocal microscopy revealed intensive EcAMP1 binding to the surface of fungal conidia followed by internalization and accumulation in the cytoplasm without disturbance of membrane integrity. Close spatial structure similarity between EcAMP1, the trypsin inhibitor VhTI from seeds of Veronica hederifolia, and some scorpion and cone snail toxins suggests natural elaboration of different functions on a common fold.

Indexed as

Antifungal AgentsEchinochloaFungiPeptidesPlant DiseasesPlant ProteinsProtein Structure, SecondaryAntifungal AgentsPeptidesPlant Proteins

Identifiers

PMID21561864
PMCPMC3137087
OpenAlexW2009280727

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.