Evidence map›Paper›PMID 21559983›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2011

Reconstruction of karyotype evolution in core Glires. I. The genome homology revealed by comparative chromosome painting.

Violetta R Beklemisheva, Svetlana A Romanenko, Larisa S Biltueva, Vladimir A Trifonov, Nadezhda V Vorobieva, Natalya A Serdukova, Nadezhda V Rubtsova, Oleg V Brandler, Patricia C M O'Brien, Fentang Yang and 3 more

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Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Karyotype diversity suggests that Laonastes aenigmamus (Laotian rock rat) (Rodentia, Diatomyidae) is a multi-specific genus.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2016
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4 · The record

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5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Violetta R BeklemishevaDepartment of Molecular and Cellular Biology of the Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, 630090, Russia.
Svetlana A Romanenko
Larisa S Biltueva
Vladimir A Trifonov
Nadezhda V Vorobieva
Natalya A Serdukova
Nadezhda V Rubtsova
Oleg V Brandler
Patricia C M O'Brien
Fentang Yang
Roscoe Stanyon
Malcolm A Ferguson-Smith
Alexander S Graphodatsky
Siberian Branch of the Russian Academy of Sciences · RUUniversity of Cambridge · GBInstitute of Chemical Biology and Fundamental Medicine · RUKoltzov Institute of Developmental Biology · RUUniversity of Florence · ITWellcome Sanger Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glires represent a eutherian clade consisting of rodents and lagomorphs (hares, rabbits, and pikas). Chromosome evolution of Glires is known to have variable rates in different groups: from slowly evolving lagomorphs and squirrels to extremely rapidly evolving muroids. Previous interordinal homology maps between slowly evolving Glires were based on comparison with humans. Here, we used sets of chromosome-specific probes from Tamias sibiricus (Sciuridae), Castor fiber (Castoridae) and humans to study karyotypes of six ground squirrels (genera Marmota and Spermophilus) and one tree squirrel (genus Sciurus), mountain hare (genus Lepus), and rabbit (genus Oryctolagus). These data supplemented with GTG banding comparisons allowed us to build comparative chromosome maps. Our data showed the absence of previously found squirrel associations HSA 1/8 and 2/17 in the Eurasian ground squirrels--sousliks and woodchucks, and disruptions of squirrel HSA 10/13 and HSA 8/4/8/12/22 syntenies in the four Spermophilus species studied here. We found that the karyotypes of Sciuridae and Leporidae are highly conserved and close to the Rodentia ancestral karyotype, while Castoridae chromosomes underwent many more changes. We suggest that Lagomorpha and Sciuridae (in contrast to all other rodent families) should be considered as core Glires lineages, characterized by cytogenetically conserved karyotypes which contain chromosomal elements inherent to karyotype of common Glires ancestor. Our data allowed us to further refine the putative ancestral karyotypes of Rodentia. We also describe here the putative ancestral karyotypes of Glires and lagomorphs.

Indexed as

Chromosome PaintingEvolution, MolecularSequence HomologyAnimalsChromosome BandingChromosome MappingChromosomes, MammalianFemaleGenomeHumansKaryotypingMaleMammalsRabbits

Identifiers

PMID21559983
OpenAlexW2087392790

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.