Evidence map›Paper›PMID 21555580›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Functional relevance of the histone gammaH2Ax in the response to DNA damaging agents.

Ingrid Revet, Luzviminda Feeney, Stephanie Bruguera, Wade Wilson, Tiffany K Dong, Dennis H Oh, David Dankort, James E Cleaver

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 131 citations in OpenAlex.

  1. Advancing genotoxicity assessment with transcriptomic biomarkers: from 2D to 3D HepaRG spheroid models.Toxicological sciences : an official journal of the Society of Toxicology · 2026
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  20. Epigenetic Regulation of Nucleotide Excision Repair.Frontiers in cell and developmental biology · 2022
    Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Ingrid RevetDepartment of Dermatology, University of California, San Francisco, CA 94143-0808, USA.
Luzviminda Feeney
Stephanie Bruguera
Wade Wilson
Tiffany K Dong
Dennis H Oh
David Dankort
James E Cleaver
University of California, San Francisco · USSan Francisco VA Medical Center · USMcGill University · CA

Funding

Mechanism of Triplex DNA Damage and Repair in Skin CellsR01CA105958 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI OH, DENNIS H · 2003 to 2007
$1.1M
NCI NIH HHS CA105958NCI NIH HHS R01 CA105958
6 · The paper itself

Abstract

The phosphorylation of H2Ax on its S139 site, γH2Ax, is important during DNA double-strand repair and is considered necessary for assembly of repair complexes, but its functional role after other kinds of DNA damage is less clear. We have measured the survival of isogenic mouse cell lines with the H2Ax gene knocked out, and replaced with wild-type or mutant (S139A) H2Ax genes, exposed to a range of agents with varied mechanisms of DNA damage. Knockout and mutant cells were sensitive to γ-rays, etoposide, temozolamide, and endogenously generated reactive oxygen species, each of which can include double-strand breaks among their spectra of DNA lesions. The absence or mutation of H2Ax had no influence on sensitivity to cisplatin or mitomycin C. Although UV light induced the highest levels of γH2Ax, mutation of S139 had no influence on UV sensitivity or the UV DNA damage response. Complete loss of H2Ax reduced the survival of cells exposed to UV light and reduced pChk1 induction, suggesting that sites other than S139 may impact the ATR-pChk1 pathway. The relative intensity of γH2Ax measured in Western blots in wild-type cells did not correlate with the functional importance of γH2Ax. The use of γH2Ax as a general biomarker of DNA damage is therefore potentially misleading because it is not an unambiguous indicator of double-strand breaks, and a significant fraction of DNA repair, especially involving nucleotide excision or crosslink repair, can occur without functional involvement of γH2Ax.

Indexed as

DNA DamageAnimalsCell LineCheckpoint Kinase 1DNA RepairGene Knockout TechniquesHistonesMiceMutationPhosphorylationProtein KinasesTransgenesCheckpoint Kinase 1gamma-H2AX protein, mouseHistonesProtein Kinases

Identifiers

PMID21555580
PMCPMC3102364
OpenAlexW2139380885

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.