Evidence map›Paper›PMID 21555071›Full record

ArticleNeuron2011

Mechanistic logic underlying the axonal transport of cytosolic proteins.

David A Scott, Utpal Das, Yong Tang, Subhojit Roy

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 121 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Imaging Diversity in Slow Axonal Transport.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Finding order in slow axonal transport.Current opinion in neurobiology · 2020
    Review
  16. Axonal transport: Driving synaptic function.Science (New York, N.Y.) · 2019
    Review
  17. Article
  18. Review
  19. Defects in Axonal Transport in Inherited Neuropathies.Journal of neuromuscular diseases · 2019
    Review
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

David A ScottDepartment of Neurosciences, University of California, San Diego, La Jolla, CA 92093, USA.
Utpal Das
Yong Tang
Subhojit Roy
University of California San Diego · US

Funding

VIRUS-INDUCED BRAIN PATHOLOGYP50AG005131 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BREWER, JAMES B · 1985 to 2018
$55.4M
Slow axonal transport of cytosolic cargoes by dynamic-recruitment - a new trafficR01NS075233 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI ROY, SUBHOJIT · 2012 to 2023
$3.4M
NIA NIH HHS P50 AG005131NIA NIH HHS P50AG005131-PROJECT 2NINDS NIH HHS R01 NS075233
6 · The paper itself

Abstract

Proteins vital to presynaptic function are synthesized in the neuronal perikarya and delivered into synapses via two modes of axonal transport. While membrane-anchoring proteins are conveyed in fast axonal transport via motor-driven vesicles, cytosolic proteins travel in slow axonal transport via mechanisms that are poorly understood. We found that in cultured axons, populations of cytosolic proteins tagged to photoactivatable GFP (PAGFP) move with a slow motor-dependent anterograde bias distinct from both vesicular trafficking and diffusion of untagged PAGFP. The overall bias is likely generated by an intricate particle kinetics involving transient assembly and short-range vectorial spurts. In vivo biochemical studies reveal that cytosolic proteins are organized into higher order structures within axon-enriched fractions that are largely segregated from vesicles. Data-driven biophysical modeling best predicts a scenario where soluble molecules dynamically assemble into mobile supramolecular structures. We propose a model where cytosolic proteins are transported by dynamically assembling into multiprotein complexes that are directly/indirectly conveyed by motors.

Indexed as

LogicModels, NeurologicalAnimalsAnimals, NewbornAxonal TransportBiophysical PhenomenaCalcium-Calmodulin-Dependent Protein Kinase Type 2Computer SimulationCytosolGAP-43 ProteinGreen Fluorescent ProteinsHippocampusIn Vitro TechniquesMiceMicroscopy, ConfocalNeuronsCalcium-Calmodulin-Dependent Protein Kinase Type 2GAP-43 ProteinGreen Fluorescent ProteinsSynapsins

Identifiers

PMID21555071
PMCPMC3096075
OpenAlexW2115129558

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.