Evidence map›Paper›PMID 21554951›Full record

ArticleResearch in microbiology2011

Modulation of Pseudomonas aeruginosa surface-associated group behaviors by individual amino acids through c-di-GMP signaling.

Steve P Bernier, Dae-Gon Ha, Wajiha Khan, Judith H Merritt, George A O'Toole

Abstract read
In one paragraph

Article in Research in microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 147 citations in OpenAlex.

  1. Host-derived stimuli alter intracellular calcium levels inApplied and environmental microbiology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Long-term culturing ofApplied and environmental microbiology · 2025
    Article
  8. Article
  9. Arginine at the host-pathogen interface.Infection and immunity · 2025
    Review
  10. Arginine utilization inInfection and immunity · 2025
    Article
  11. Article
  12. The effect of cCMP and cUMP on growth ofFrontiers in microbiology · 2025
    Article
  13. Frontiers in medicine · 2025
    Article
  14. Article
  15. Effect of L-arginine on cystic fibrosisAntimicrobial agents and chemotherapy · 2024
    Article
  16. Gene expression reprogramming ofMicrobiology (Reading, England) · 2024
    Article
  17. Article
  18. Hydroquinine Inhibits the Growth of Multidrug-ResistantInternational journal of molecular sciences · 2023
    Article
  19. Review
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Steve P BernierDepartment of Microbiology & Immunology, Dartmouth Medical School, North College St., Hanover, NH 03755, USA. sbernier19@gmail.com
Dae-Gon Ha
Wajiha Khan
Judith H Merritt
George A O'Toole
Dartmouth College · USQuaid-i-Azam University · PK

Funding

Molecular and Cellular Biology at DartmouthT32GM008704 · NIGMS · DARTMOUTH COLLEGE · PI COMPTON, DUANE A. · 1998 to 2018
$6.8M
cdiGMP regulation of Biofilm FormationR01AI083256 · NIAID · DARTMOUTH COLLEGE · PI O'TOOLE, GEORGE A. · 2009 to 2013
$1.9M
NIAID NIH HHS R01 AI083256NIAID NIH HHS R01AI083256NIGMS NIH HHS T32 GM008704NIGMS NIH HHS T32 GM08704
6 · The paper itself

Abstract

To colonize the cystic fibrosis lung, Pseudomonas aeruginosa establishes sessile communities referred to as biofilms. Although the signaling molecule c-di-GMP governs the transition from motile to sessile growth, the environmental signal(s) required to modulate biofilm formation remain unclear. Using relevant in vivo concentrations of the 19 amino acids previously identified in cystic fibrosis sputum, we demonstrated that arginine, ornithine, isoleucine, leucine, valine, phenylalanine and tyrosine robustly promoted biofilm formation in vitro. Among the seven biofilm-promoting amino acids, only arginine also completely repressed the ability of P. aeruginosa to swarm over semi-solid surfaces, suggesting that arginine may be an environmental cue favoring a sessile lifestyle. Mutating two documented diguanylate cyclases required for biofilm formation (SadC and RoeA) reduced biofilm formation and restored swarming motility on arginine-containing medium. Growth on arginine increased the intracellular levels of c-di-GMP, and this increase was dependent on the SadC and RoeA diguanylate cyclases. Strains mutated in sadC, roeA or both also showed a reduction in biofilm formation when grown with the other biofilm-promoting amino acids. Taken together, these results suggest that amino acids can modulate biofilm formation and swarming motility, at least in part, by controlling the intracellular levels of c-di-GMP.

Indexed as

Signal TransductionAmino AcidsBacterial ProteinsBiofilmsCyclic GMPEscherichia coli ProteinsPhosphorus-Oxygen LyasesPseudomonas aeruginosaAmino AcidsBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPdiguanylate cyclaseEscherichia coli ProteinsPhosphorus-Oxygen Lyases

Identifiers

PMID21554951
PMCPMC3716369
OpenAlexW2045675480

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.