Evidence map›Paper›PMID 21551159›Full record

ArticlePlant & cell physiology2011

Rice debranching enzyme isoamylase3 facilitates starch metabolism and affects plastid morphogenesis.

Min-Soo Yun, Takayuki Umemoto, Yasushi Kawagoe

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 63 citations in OpenAlex.

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  11. Disruption ofInternational journal of molecular sciences · 2022
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  12. Article
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  14. Article
  15. Review
  16. Functional Analysis of Starch Metabolism in Plants.Plants (Basel, Switzerland) · 2020
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Min-Soo YunDivision of Plant Sciences, National Institute of Agrobiological Sciences, Kannondai, Tsukuba, Japan.
Takayuki Umemoto
Yasushi Kawagoe
Institute of Agrobiological Sciences · JPInstitute of Crop Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Debranching enzymes, which hydrolyze α-1 and 6-glucosidic linkages in α-polyglucans, play a dual role in the synthesis and degradation of starch in plants. A transposon-inserted rice mutant of isoamylase3 (isa3) contained an increased amount of starch in the leaf blade at the end of the night, indicating that ISA3 plays a role in the degradation of transitory starch during the night. An epitope-tagged ISA3 expressed in Escherichia coli exhibited hydrolytic activity on β-limit dextrin and amylopectin. We investigated whether ISA3 plays a role in amyloplast development and starch metabolism in the developing endosperm. ISA3-green fluorescent protein (GFP) fusion protein expressed under the control of the rice ISA3 promoter was targeted to the amyloplast stroma in the endosperm. Overexpression of ISA3 in the sugary1 mutant, which is deficient in ISA1 activity, did not convert water-soluble phytoglycogen to starch granules, indicating that ISA1 and ISA3 are not functionally redundant. Both overexpression and loss of function of ISA3 in the endosperm generated pleomorphic amyloplasts and starch granules. Furthermore, chloroplasts in the leaf blade of isa3 seedlings were large and pleomorphic. These results suggest that ISA3 facilitates starch metabolism and affects morphological characteristics of plastids in rice.

Indexed as

DNA Transposable ElementsEndospermEscherichia coliGene Expression Regulation, PlantGene Knockdown TechniquesGenotypeIsoamylaseMorphogenesisOryzaPlant LeavesPlant ProteinsPlants, Genetically ModifiedPlastidsRecombinant Fusion ProteinsStarchSubstrate SpecificityDNA Transposable ElementsIsoamylasePlant ProteinsRecombinant Fusion ProteinsStarch

Identifiers

PMID21551159
PMCPMC3110883
OpenAlexW2165366196

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.