Evidence map›Paper›PMID 21548129›Full record

ArticleAmerican journal of medical genetics. Part A2011

Distinctive phenotype in 9 patients with deletion of chromosome 1q24-q25.

Deepika D'Cunha Burkardt, Jill A Rosenfeld, Maria L Helgeson, Brad Angle, Valerie Banks, Wendy E Smith, Karen W Gripp, Jessica Moline, Rocio T Moran, Dmitriy M Niyazov and 7 more

Abstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 62 citations in OpenAlex.

  1. Pooled it
  2. Detection of a complex chromosomal rearrangement in a novel mouse mutant by optical genome mapping.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  3. Article
  4. Review
  5. Pathogenic variants in the paired-related homeobox 1 gene (PRRX1) cause craniosynostosis with incomplete penetrance.Genetics in medicine : official journal of the American College of Medical Genetics · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Abnormal DNA Methylation in Thoracic Spinal Cord Tissue Following Transection Injury.Medical science monitor : international medical journal of experimental and clinical research · 2018
    Article
  14. MicroRNAs in orthopaedic research: Disease associations, potential therapeutic applications, and perspectives.Journal of orthopaedic research : official publication of the Orthopaedic Research Society · 2018
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 10 institutions in 1 country.

Deepika D'Cunha BurkardtMedical Genetics Institute, Cedars Sinai Medical Center, Los Angeles, California, USA.
Jill A Rosenfeld
Maria L Helgeson
Brad Angle
Valerie Banks
Wendy E Smith
Karen W Gripp
Jessica Moline
Rocio T Moran
Dmitriy M Niyazov
Cathy A Stevens
Elaine Zackai
Robert Roger Lebel
Douglas G Ashley
Nancy Kramer
Ralph S Lachman
John M Graham
Cedars-Sinai Medical Center · USCleveland Clinic · USLurie Children's Hospital · USMaine Medical Center · USChildren’s Hospital at Erlanger · USChildren's Hospital of Philadelphia · USCommunity Health Systems - Dupont Hospital · USOchsner Medical Center · USSignature Analytics (United States) · USSUNY Upstate Medical University · US

Funding

ZONA-FREE HAMSTER OVA ASSAY AS AN INDICATOR OF MALE FERTILITYM01RR000425 · NCRR · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI WANG, CHRISTINA C. · 1985 to 2011
$74.2M
THE SKELETAL DYSPLASIASP01HD022657 · NICHD · CEDARS-SINAI MEDICAL CENTER · PI RIMOIN, DAVID L · 1987 to 2011
$17.0M
UCLA Medical Genetics Training ProgramT32GM008243 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Julian Martinez-Agosto, STANLEY F. NELSON · 1987 to 2026
$6.8M
NCRR NIH HHS M01 RR000425NCRR NIH HHS M01-RR00425NICHD NIH HHS HD36657NICHD NIH HHS P01 HD022657NIGMS NIH HHS 5-T32-GM08243NIGMS NIH HHS T32 GM008243
6 · The paper itself

Abstract

Reports of individuals with deletions of 1q24→q25 share common features of prenatal onset growth deficiency, microcephaly, small hands and feet, dysmorphic face and severe cognitive deficits. We report nine individuals with 1q24q25 deletions, who show distinctive features of a clinically recognizable 1q24q25 microdeletion syndrome: prenatal-onset microcephaly and proportionate growth deficiency, severe cognitive disability, small hands and feet with distinctive brachydactyly, single transverse palmar flexion creases, fifth finger clinodactyly and distinctive facial features: upper eyelid fullness, small ears, short nose with bulbous nasal tip, tented upper lip, and micrognathia. Radiographs demonstrate disharmonic osseous maturation with markedly delayed bone age. Occasional features include cleft lip and/or palate, cryptorchidism, brain and spinal cord defects, and seizures. Using oligonucleotide-based array comparative genomic hybridization, we defined the critical deletion region as 1.9 Mb at 1q24.3q25.1 (chr1: 170,135,865-172,099,327, hg18 coordinates), containing 13 genes and including CENPL, which encodes centromeric protein L, a protein essential for proper kinetochore function and mitotic progression. The growth deficiency in this syndrome is similar to what is seen in other types of primordial short stature with microcephaly, such as Majewski osteodysplastic primordial dwarfism, type II (MOPD2) and Seckel syndrome, which result from loss-of-function mutations in genes coding for centrosomal proteins. DNM3 is also in the deleted region and expressed in the brain, where it participates in the Shank-Homer complex and increases synaptic strength. Therefore, DNM3 is a candidate for the cognitive disability, and CENPL is a candidate for growth deficiency in this 1q24q25 microdeletion syndrome.

Indexed as

Chromosome DeletionPhenotypeAbnormalities, MultipleAdolescentChildChild, PreschoolChromosome DisordersChromosomes, Human, Pair 1Comparative Genomic HybridizationFaceHumansInfantIn Situ Hybridization, FluorescenceIntellectual DisabilityMicroarray AnalysisSyndrome

Identifiers

PMID21548129
PMCPMC3109510
OpenAlexW2071501859

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.