Evidence map›Paper›PMID 21547082›Full record

ArticlePloS one2011

Mouse mutants for the nicotinic acetylcholine receptor ß2 subunit display changes in cell adhesion and neurodegeneration response genes.

Carol M Rubin, Deborah A van der List, Jose M Ballesteros, Andrey V Goloshchapov, Leo M Chalupa, Barbara Chapman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Carol M RubinDepartment of Neurobiology, Physiology, and Behavior, University of California Davis, Davis, California, United States of America.
Deborah A van der List
Jose M Ballesteros
Andrey V Goloshchapov
Leo M Chalupa
Barbara Chapman
University of California, Davis · USGeorge Washington University · US

Funding

DEVELOPMENT AND REORGANIZATION OF PRENATAL VISUAL SYSTEMR01EY003991 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI CHAPMAN, BARBARA · 1986 to 2010
$4.1M
Development of Visual PathwaysR01EY011369 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI CHENG, HWAI-JONG · 1996 to 2013
$3.4M
Prenatal Development of Visual SystemR01EY016182 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI USREY, W MARTIN · 2005 to 2014
$3.3M
NEI NIH HHS EY003991NEI NIH HHS EY016182NEI NIH HHS R01 EY003991NEI NIH HHS R01 EY011369NEI NIH HHS R01 EY016182
6 · The paper itself

Abstract

Mice lacking expression of the ß2 subunit of the neuronal nicotinic acetylcholine receptor (CHRNB2) display abnormal retinal waves and a dispersed projection of retinal ganglion cell (RGC) axons to their dorsal lateral geniculate nuclei (dLGNs). Transcriptomes of LGN tissue from two independently generated Chrnb2-/- mutants and from wildtype mice were obtained at postnatal day 4 (P4), during the normal period of segregation of eye-specific afferents to the LGN. Microarray analysis reveals reduced expression of genes located on the cell membrane or in extracellular space, and of genes active in cell adhesion and calcium signaling. In particular, mRNA for cadherin 1 (Cdh1), a known axon growth regulator, is reduced to nearly undetectable levels in the LGN of P4 mutant mice and Lypd2 mRNA is similarly suppressed. Similar analysis of retinal tissue shows increased expression of crumbs 1 (Crb1) and chemokine (C-C motif) ligand 21 (Ccl21) mRNAs in Chrnb2-/- mutant animals. Mutations in these genes are associated with retinal neuronal degeneration. The retinas of Chrnb2-/- mutants are normal in appearance, but the increased expression of these genes may also be involved in the abnormal projection patterns of RGC to the LGN. These data may provide the tools to distinguish the interplay between neural activity and molecular expression. Finally, comparison of the transcriptomes of the two different Chrnb2-/- mutant strains reveals the effects of genetic background upon gene expression.

Indexed as

AnimalsCadherinsCell AdhesionImmunohistochemistryMiceMice, Mutant StrainsNerve DegenerationOligonucleotide Array Sequence AnalysisReceptors, NicotinicRetinal DegenerationRetinal Ganglion CellsReverse Transcriptase Polymerase Chain ReactionCadherinsReceptors, Nicotinic

Identifiers

PMID21547082
PMCPMC3081876
OpenAlexW1991857124

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.