Evidence map›Paper›PMID 21544008›Full record

ArticlePediatric research2011

Live colonocytes in newborn stool: surrogates for evaluation of gut physiology and disease pathogenesis.

Dinesh S Chandel, Gheorghe T Braileanu, June-Home J Chen, Hegang H Chen, Pinaki Panigrahi

Abstract read
In one paragraph

Article in Pediatric research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. DNA Methylation ofFrontiers in pediatrics · 2021
    Article
  3. CK19 stabilizes CFTR at the cell surface by limiting its endocytic pathway degradation.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dinesh S ChandelDepartment of Environmental, Agricultural and Occupational Health, Center for Global Health and Development, College of Public Health, University of Nebraska Medical Center, Omaha, Nebraska 68198, USA.
Gheorghe T Braileanu
June-Home J Chen
Hegang H Chen
Pinaki Panigrahi

Funding

Prevention of neonatal infection in the Indian community setting using probioticsR01HD053719 · NICHD · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PANIGRAHI, PINAKI · 2007 to 2011
$2.3M
NICHD NIH HHS R01 HD053719NICHD NIH HHS R01HD53719
6 · The paper itself

Abstract

Studies of gastrointestinal pathophysiology are not feasible by biopsies in human neonates. We examined the utility of live colonocytes in stool in studying cellular markers during early neonatal life. Expression of IgA, IgG, cluster of differentiation-45 cells (CD45), and toll-like receptors-2 and 4 (TLR2 and TLR4) were analyzed by flow cytometry. Colonocyte RNA extracts were used in quantitative real-time PCR (qRT-PCR) to examine the expression of cytokeratin-19, ribosomal protein-24, and tight-junction (Tj) protein zonula occludens-1 (ZO-1). Colonocyte yield varied between 5 × 10⁴ to 2 × 10⁶ cells/g of stool. Meconium samples yielded a highly enriched population of viable cells. Although low, all samples showed CD45-positive cells during the initial weeks of life. Starting as early as d 2, IgA expression was observed in 69% of the cells. Low to moderate expression of IgG was observed with a linear increase as the infants grew. There was an almost total lack of TLR2 staining; however, >55% of the colonocytes showed TLR4 expression. Although high levels of IgA in gut cells may serve as a natural protectant during neonatal period, increased TLR4 may provide a niche for lipopolysaccharide (LPS)-mediated epithelial damage. Use of stool colonocytes can be a valuable noninvasive approach for studying gut pathophysiology in the neonatal period.

Indexed as

BiomarkersColonEpithelial CellsFecesFlow CytometryGastrointestinal TractHumansImmunoglobulin AImmunoglobulin GInfant, NewbornKeratin-19Leukocyte Common AntigensMembrane ProteinsPhosphoproteinsReverse Transcriptase Polymerase Chain ReactionRibosomal ProteinsBiomarkersImmunoglobulin AImmunoglobulin GKeratin-19Leukocyte Common AntigensMembrane ProteinsPhosphoproteinsRibosomal ProteinsTJP1 protein, humanToll-Like Receptor 2Toll-Like Receptor 4Zonula Occludens-1 Protein

Identifiers

PMID21544008
PMCPMC3140458

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.