Evidence map›Paper›PMID 21540640›Full record

ArticleEpigenetics2011

Aberrant TGFβ/SMAD4 signaling contributes to epigenetic silencing of a putative tumor suppressor, RunX1T1 in ovarian cancer.

Kun-Tu Yeh, Tze-Ho Chen, Hui-Wen Yang, Jian-Liang Chou, Lin-Yu Chen, Chia-Ming Yeh, Yu-Hsin Chen, Ru-Inn Lin, Her-Young Su, Gary C W Chen and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 43 citations in OpenAlex.

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  15. C/EBPβ regulates homeostatic and oncogenic gastric cell proliferation.Journal of molecular medicine (Berlin, Germany) · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 2 countries.

Kun-Tu YehDepartment of Pathology, Changhua Christian Hospital, Changhua, Republic of China.
Tze-Ho Chen
Hui-Wen Yang
Jian-Liang Chou
Lin-Yu Chen
Chia-Ming Yeh
Yu-Hsin Chen
Ru-Inn Lin
Her-Young Su
Gary C W Chen
Daniel E Deatherage
Yi-Wen Huang
Pearlly S Yan
Huey-Jen Lin
Kenneth P Nephew
Tim H-M Huang
Hung-Cheng Lai
Michael W Y Chan
U-M Rogel Cancer CenterComprehensive Blood & Cancer Center · USNational Defense Medical Center · TWBuddhist Tzu Chi General Hospital · TWChanghua Christian Hospital · TWChung Shan Medical University · TWIndiana University · USThe Ohio State University · US

Funding

DNA Methylation and Ovarian CancerR01CA085289 · NCI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI NEPHEW, KENNETH P · 2002 to 2012
$2.4M
NCI NIH HHS R01 CA085289
6 · The paper itself

Abstract

Aberrant TGFβ signaling pathway may alter the expression of down-stream targets and promotes ovarian carcinogenesis. However, the mechanism of this impairment is not fully understood. Our previous study has identified RunX1T1 as a putative SMAD4 target in an immortalized ovarian surface epithelial cell line, IOSE. In this study, we report that transcription of RunX1T1 was confirmed to be positively regulated by SMAD4 in IOSE cells and epigenetically silenced in a panel of ovarian cancer cell lines by promoter hypermethylation and histone methylation at H3 lysine 9. SMAD4 depletion increased repressive histone modifications of RunX1T1 promoter without affecting promoter methylation in IOSE cells. Epigenetic treatment can restore RunX1T1 expression by reversing its epigenetic status in MCP3 ovarian cancer cells. When transiently treated with a demethylating agent, the expression of RunX1T1 was partially restored in MCP3 cells, but gradual re-silencing through promoter re-methylation was observed after the treatment. Interestingly, SMAD4 knockdown accelerated this re-silencing process, suggesting that normal TGF-beta signaling is essential for the maintenance of RunX1T1 expression. In vivo analysis confirmed that hypermethylation of RunX1T1 was detected in 35.7% (34/95) of ovarian tumors with high clinical stages (P=0.035) and in 83% (5/6) of primary ovarian cancer-initiating cells. Additionally, concurrent methylation of RunX1T1 and another SMAD4 target, FBXO32 which was previously found to be hypermethylated in ovarian cancer was observed in this same sample cohort (P< 0.05). Restoration of RunX1T1 inhibited cancer cell growth. Taken together, dysregulated TGFβ/SMAD4 signaling may lead to epigenetic silencing of a putative tumor suppressor, RunX1T1, during ovarian carcinogenesis.

Indexed as

Epigenesis, GeneticSignal TransductionCell Line, TumorDNA MethylationFemaleGene SilencingHistonesHumansNeoplasm StagingOvarian NeoplasmsPromoter Regions, GeneticProto-Oncogene ProteinsRUNX1 Translocation Partner 1 ProteinTranscription FactorsTransforming Growth Factor betaHistonesProto-Oncogene ProteinsRUNX1T1 protein, humanRUNX1 Translocation Partner 1 ProteinTranscription FactorsTransforming Growth Factor beta

Identifiers

PMID21540640
PMCPMC3359493
OpenAlexW2090166037

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.