Evidence map›Paper›PMID 21540176›Full record

ArticleThe Journal of biological chemistry2011

Transient receptor potential mucolipin 1 (TRPML1) and two-pore channels are functionally independent organellar ion channels.

Soichiro Yamaguchi, Archana Jha, Qin Li, Abigail A Soyombo, George D Dickinson, Dev Churamani, Eugen Brailoiu, Sandip Patel, Shmuel Muallem

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 101 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. NAADP-Dependent TPC Current.Handbook of experimental pharmacology · 2023
    Article
  10. Review
  11. Article
  12. Review
  13. Targeting the two-pore channel 2 in cancer progression and metastasis.Exploration of targeted anti-tumor therapy · 2022
    Review
  14. Review
  15. Article
  16. Lysosomal TRPML1 Channel: Implications in Cardiovascular and Kidney Diseases.Advances in experimental medicine and biology · 2021
    Article
  17. NAADP: From Discovery to Mechanism.Frontiers in immunology · 2021
    Review
  18. Roles of NADMolecules (Basel, Switzerland) · 2020
    Review
  19. Article
  20. Lysosomal CaCold Spring Harbor perspectives in biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Soichiro YamaguchiDepartment of Physiology, University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75235, USA.
Archana Jha
Qin Li
Abigail A Soyombo
George D Dickinson
Dev Churamani
Eugen Brailoiu
Sandip Patel
Shmuel Muallem
The University of Texas Southwestern Medical Center · USUniversity College London · GBNational Institute of Dental and Craniofacial Research · USTemple University · US

Funding

Ca2+ signaling and HCO3- secretion by exocrine glandsZIADE000735 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI MUALLEM, SHMUEL · 2010 to 2025
$43.1M
MOLECULAR MECHANISMS OF ION TRANSPORT BY THE SMGR01DE012309 · NIDCR · UT SOUTHWESTERN MEDICAL CENTER · PI THOMAS, PHILIP J · 1997 to 2011
$4.4M
HORMONE REGULATION OF CA++ I- IN PANCREATIC ACINAR CELLSR01DK038938 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI STULL, JAMES TRAVIS · 1987 to 2010
$3.7M
Role of nonnuclear estrogen receptor GPR30 in preganglionic vagal neuronsR01HL090804 · NHLBI · TEMPLE UNIV OF THE COMMONWEALTH · PI BRAILOIU, EUGEN · 2009 to 2012
$1.5M
Biotechnology and Biological Sciences Research Council BB/G013721/1Intramural NIH HHS ZIA DE000735NHLBI NIH HHS HL90804NHLBI NIH HHS R01 HL090804NIDCR NIH HHS DE12309NIDCR NIH HHS R01 DE012309NIDDK NIH HHS DK38938NIDDK NIH HHS R01 DK038938
6 · The paper itself

Abstract

NAADP is a potent second messenger that mobilizes Ca(2+) from acidic organelles such as endosomes and lysosomes. The molecular basis for Ca(2+) release by NAADP, however, is uncertain. TRP mucolipins (TRPMLs) and two-pore channels (TPCs) are Ca(2+)-permeable ion channels present within the endolysosomal system. Both have been proposed as targets for NAADP. In the present study, we probed possible physical and functional association of these ion channels. Exogenously expressed TRPML1 showed near complete colocalization with TPC2 and partial colocalization with TPC1. TRPML3 overlap with TPC2 was more modest. TRPML1 and to some extent TRPML3 co-immunoprecipitated with TPC2 but less so with TPC1. Current recording, however, showed that TPC1 and TPC2 did not affect the activity of wild-type TRPML1 or constitutively active TRPML1(V432P). N-terminally truncated TPC2 (TPC2delN), which is targeted to the plasma membrane, also failed to affect TRPML1 and TRPML1(V432P) channel function or TRPML1(V432P)-mediated Ca(2+) influx. Whereas overexpression of TPCs enhanced NAADP-mediated Ca(2+) signals, overexpression of TRPML1 did not, and the dominant negative TRPML1(D471K) was without affect on endogenous NAADP-mediated Ca(2+) signals. Furthermore, the single channel properties of NAADP-activated TPC2delN were not affected by TRPML1. Finally, NAADP-evoked Ca(2+) oscillations in pancreatic acinar cells were identical in wild-type and TRPML1(-/-) cells. We conclude that although TRPML1 and TPCs are present in the same complex, they function as two independent organellar ion channels and that TPCs, not TRPMLs, are the targets for NAADP.

Indexed as

Amino Acid SubstitutionCalciumCalcium ChannelsEndosomesHEK293 CellsHeLa CellsHumansLysosomesMutation, MissenseNADPPancreas, ExocrineTransient Receptor Potential ChannelsTRPM Cation ChannelsTwo-Pore ChannelsCalciumCalcium ChannelsMCOLN1 protein, humanNAADPNADPTPCN1 protein, humanTPCN2 protein, humanTransient Receptor Potential ChannelsTRPM Cation ChannelsTwo-Pore Channels

Identifiers

PMID21540176
PMCPMC3123061
OpenAlexW2078502414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.