Evidence map›Paper›PMID 21533164›Full record

ArticlePloS one2011

Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.

Jerônimo C Ruiz, Vívian D'Afonseca, Artur Silva, Amjad Ali, Anne C Pinto, Anderson R Santos, Aryanne A M C Rocha, Débora O Lopes, Fernanda A Dorella, Luis G C Pacheco and 49 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 125 citations in OpenAlex.

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  18. Insight of GenusFrontiers in microbiology · 2017
    Review
  19. Multilocus Sequencing ofBioMed research international · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

59 authors at 15 institutions in 3 countries.

Jerônimo C RuizResearch Center René Rachou, Oswaldo Cruz Foundation, Belo Horizonte, Minas Gerais, Brazil.
Vívian D'Afonseca
Artur Silva
Amjad Ali
Anne C Pinto
Anderson R Santos
Aryanne A M C Rocha
Débora O Lopes
Fernanda A Dorella
Luis G C Pacheco
Marcília P Costa
Meritxell Z Turk
Núbia Seyffert
Pablo M R O Moraes
Siomar C Soares
Sintia S Almeida
Thiago L P Castro
Vinicius A C Abreu
Eva Trost
Jan Baumbach
Andreas Tauch
Maria Paula C Schneider
John McCulloch
Louise T Cerdeira
Rommel T J Ramos
Adhemar Zerlotini
Anderson Dominitini
Daniela M Resende
Elisângela M Coser
Luciana M Oliveira
André L Pedrosa
Carlos U Vieira
Cláudia T Guimarães
Daniela C Bartholomeu
Diana M Oliveira
Fabrício R Santos
Élida Mara Rabelo
Francisco P Lobo
Glória R Franco
Ana Flávia Costa
Ieso M Castro
Sílvia Regina Costa Dias
Jesus A Ferro
José Miguel Ortega
Luciano V Paiva
Luiz R Goulart
Juliana Franco Almeida
Maria Inês T Ferro
Newton P Carneiro
Paula R K Falcão
Priscila Grynberg
Santuza M R Teixeira
Sérgio Brommonschenkel
Sérgio C Oliveira
Roberto Meyer
Robert J Moore
Anderson Miyoshi
Guilherme C Oliveira
Vasco Azevedo
Universidade Federal de Minas Gerais · BRFundação Oswaldo Cruz · BRUniversidade Federal do Pará · BRBrazilian Agricultural Research Corporation · BRUniversidade Federal de Ouro Preto · BRUniversidade Federal de Uberlândia · BRBielefeld University · DEUniversidade de São Paulo · BRUniversidade Estadual do Ceará · BRCommonwealth Scientific and Industrial Research Organisation · AUFederal University of São João del-Rei · BRMax Planck Institute for Informatics · DEUniversidade Federal da Bahia · BRUniversidade Federal de Lavras · BRUniversidade Federal de Viçosa · BR

Funding

INFORMATICS TRAINING FOR BRAZILIAN VECTOR AND PARASITIC DISEASED43TW007012 · FIC · UNIVERSITY OF GEORGIA (UGA) · PI KISSINGER, JESSICA C · 2004 to 2013
$1.9M
FIC NIH HHS D43 TW007012FIC NIH HHS TW007012
6 · The paper itself

Abstract

backgroundCorynebacterium pseudotuberculosis, a gram-positive, facultative intracellular pathogen, is the etiologic agent of the disease known as caseous lymphadenitis (CL). CL mainly affects small ruminants, such as goats and sheep; it also causes infections in humans, though rarely. This species is distributed worldwide, but it has the most serious economic impact in Oceania, Africa and South America. Although C. pseudotuberculosis causes major health and productivity problems for livestock, little is known about the molecular basis of its pathogenicity. METHODOLOGY AND

findingsWe characterized two C. pseudotuberculosis genomes (Cp1002, isolated from goats; and CpC231, isolated from sheep). Analysis of the predicted genomes showed high similarity in genomic architecture, gene content and genetic order. When C. pseudotuberculosis was compared with other Corynebacterium species, it became evident that this pathogenic species has lost numerous genes, resulting in one of the smallest genomes in the genus. Other differences that could be part of the adaptation to pathogenicity include a lower GC content, of about 52%, and a reduced gene repertoire. The C. pseudotuberculosis genome also includes seven putative pathogenicity islands, which contain several classical virulence factors, including genes for fimbrial subunits, adhesion factors, iron uptake and secreted toxins. Additionally, all of the virulence factors in the islands have characteristics that indicate horizontal transfer.

conclusionsThese particular genome characteristics of C. pseudotuberculosis, as well as its acquired virulence factors in pathogenicity islands, provide evidence of its lifestyle and of the pathogenicity pathways used by this pathogen in the infection process. All genomes cited in this study are available in the NCBI Genbank database (http://www.ncbi.nlm.nih.gov/genbank/) under accession numbers CP001809 and CP001829.

Indexed as

Evolution, MolecularGenome, BacterialCorynebacterium pseudotuberculosisVirulence

Identifiers

PMID21533164
PMCPMC3078919
OpenAlexW2146286299

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.