Evidence map›Paper›PMID 21533111›Full record

ArticlePloS one2011

Epistatic roles for Pseudomonas aeruginosa MutS and DinB (DNA Pol IV) in coping with reactive oxygen species-induced DNA damage.

Laurie H Sanders, Babho Devadoss, Geraldine V Raja, Jaime O'Connor, Shengchang Su, Daniel J Wozniak, Daniel J Hassett, Anthony J Berdis, Mark D Sutton

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Trial
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  4. Article
  5. The methylation-independent mismatch repair machinery inMicrobiology (Reading, England) · 2021
    Review
  6. The Mutant βJournal of bacteriology · 2021
    Article
  7. Review
  8. Article
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  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Laurie H SandersDepartment of Biochemistry, School of Medicine and Biomedical Sciences, University at Buffalo, State University of New York, Buffalo, New York, United States of America.
Babho Devadoss
Geraldine V Raja
Jaime O'Connor
Shengchang Su
Daniel J Wozniak
Daniel J Hassett
Anthony J Berdis
Mark D Sutton
University at Buffalo, State University of New York · USCase Western Reserve University · USUniversity of Cincinnati · USThe Ohio State University · US

Funding

Regulation of DNA Replication and RepairR01GM066094 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI SUTTON, MARK D. · 2003 to 2016
$4.0M
CONTROL OF PSEUDOMONAS AERUGINOSA ALGD TRANSCRIPTIONR01HL058334 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI WOZNIAK, DANIEL J · 1996 to 2012
$2.5M
The matrix of Pseudomonas aeruginosa biofilmsR01AI061396 · NIAID · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI WOZNIAK, DANIEL J · 2005 to 2009
$2.1M
Role of OxyR in P. aeruginosa Biofilm Resistance to H202R01GM069845 · NIGMS · UNIVERSITY OF CINCINNATI · PI HASSETT, DANIEL J. · 2004 to 2007
$1.2M
Non-natural Nucleoside Inhibitors of DNA PolymerasesR01CA118408 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI BERDIS, ANTHONY J · 2005 to 2009
$1.2M
Regulation of DNA replication and repairR56GM066094 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI SUTTON, MARK D. · 2008 to 2008
$308k
NCI NIH HHS R01 CA118408NHLBI NIH HHS R01 HL058334NHLBI NIH HHS R01 HL58334NIAID NIH HHS R01 AI061396NIGMS NIH HHS R01 GM066094NIGMS NIH HHS R01 GM069845NIGMS NIH HHS R56 GM066094
6 · The paper itself

Abstract

Pseudomonas aeruginosa is especially adept at colonizing the airways of individuals afflicted with the autosomal recessive disease cystic fibrosis (CF). CF patients suffer from chronic airway inflammation, which contributes to lung deterioration. Once established in the airways, P. aeruginosa continuously adapts to the changing environment, in part through acquisition of beneficial mutations via a process termed pathoadaptation. MutS and DinB are proposed to play opposing roles in P. aeruginosa pathoadaptation: MutS acts in replication-coupled mismatch repair, which acts to limit spontaneous mutations; in contrast, DinB (DNA polymerase IV) catalyzes error-prone bypass of DNA lesions, contributing to mutations. As part of an ongoing effort to understand mechanisms underlying P. aeruginosa pathoadaptation, we characterized hydrogen peroxide (H(2)O(2))-induced phenotypes of isogenic P. aeruginosa strains bearing different combinations of mutS and dinB alleles. Our results demonstrate an unexpected epistatic relationship between mutS and dinB with respect to H(2)O(2)-induced cell killing involving error-prone repair and/or tolerance of oxidized DNA lesions. In striking contrast to these error-prone roles, both MutS and DinB played largely accurate roles in coping with DNA lesions induced by ultraviolet light, mitomycin C, or 4-nitroquinilone 1-oxide. Models discussing roles for MutS and DinB functionality in DNA damage-induced mutagenesis, particularly during CF airway colonization and subsequent P. aeruginosa pathoadaptation are discussed.

Indexed as

DNA DamageEpistasis, GeneticCatalysisHydrogen PeroxideMutagenesisMutS DNA Mismatch-Binding ProteinPseudomonas aeruginosaReactive Oxygen SpeciesHydrogen PeroxideMutS DNA Mismatch-Binding ProteinReactive Oxygen Species

Identifiers

PMID21533111
PMCPMC3078926
OpenAlexW2037860539

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.