Evidence map›Paper›PMID 21531802›Full record

ArticleJournal of bacteriology2011

The poor growth of Rhodospirillum rubrum mutants lacking RubisCO is due to the accumulation of ribulose-1,5-bisphosphate.

Di Wang, Yaoping Zhang, Edward L Pohlmann, Jilun Li, Gary P Roberts

Abstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 42 citations in OpenAlex.

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  8. Influence of Energy and Electron Availability onApplied and environmental microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Di WangDepartment of Microbiology and Immunology, China Agricultural University, Beijing 100193, People’s Republic of China.
Yaoping Zhang
Edward L Pohlmann
Jilun Li
Gary P Roberts
University of Wisconsin–Madison · USChina Agricultural University · CN

Funding

PII: multiple homologs of a global regulatorR01GM065891 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI ROBERTS, GARY PAUL · 2002 to 2011
$2.0M
Molecular basis of PII functionR56GM065891 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI ROBERTS, GARY PAUL · 2007 to 2007
$203k
NIGMS NIH HHS GM65891NIGMS NIH HHS R01 GM065891NIGMS NIH HHS R56 GM065891
6 · The paper itself

Abstract

Ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) catalyzes the first step of CO(2) fixation in the Calvin-Benson-Bassham (CBB) cycle. Besides its function in fixing CO(2) to support photoautotrophic growth, the CBB cycle is also important under photoheterotrophic growth conditions in purple nonsulfur photosynthetic bacteria. It has been assumed that the poor photoheterotrophic growth of RubisCO-deficient strains was due to the accumulation of excess intracellular reductant, which implied that the CBB cycle is important for maintaining the redox balance under these conditions. However, we present analyses of cbbM mutants in Rhodospirillum rubrum that indicate that toxicity is the result of an elevated intracellular pool of ribulose-1,5-bisphosphate (RuBP). There is a redox effect on growth, but it is apparently an indirect effect on the accumulation of RuBP, perhaps by the regulation of the activities of enzymes involved in RuBP regeneration. Our studies also show that the CBB cycle is not essential for R. rubrum to grow under photoheterotrophic conditions and that its role in controlling the redox balance needs to be further elucidated. Finally, we also show that CbbR is a positive transcriptional regulator of the cbb operon (cbbEFPT) in R. rubrum, as seen with related organisms, and define the transcriptional organization of the cbb genes.

Indexed as

Gene DeletionRhodospirillum rubrumRibulose-Bisphosphate CarboxylaseRibulosephosphatesribulose-1,5 diphosphateRibulose-Bisphosphate CarboxylaseRibulosephosphates

Identifiers

PMID21531802
PMCPMC3133260
OpenAlexW1995209068

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.