Evidence map›Paper›PMID 21529752›Full record

ArticleAmerican journal of human genetics2011

The essential role of centrosomal NDE1 in human cerebral cortex neurogenesis.

Mehmet Bakircioglu, Ofélia P Carvalho, Maryam Khurshid, James J Cox, Beyhan Tuysuz, Tanyeri Barak, Saliha Yilmaz, Okay Caglayan, Alp Dincer, Adeline K Nicholas and 13 more

Open access · hybridAbstract read
In one paragraph

Article in American journal of human genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 1 synthesis or guideline pooled it, 162 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Liquid-liquid phase separation in neural development.Cellular and molecular life sciences : CMLS · 2026
    Review
  4. Article
  5. Non-transport functions of motor proteins in corticogenesis.Frontiers in cell and developmental biology · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Copy number variants and fetal growth in stillbirths.American journal of obstetrics and gynecology · 2023
    Article
  17. Article
  18. Review
  19. Article
  20. Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 13 institutions in 3 countries.

Mehmet BakirciogluDepartment of Neurosurgery, Center for Human Genetics and Genomics, and Program on Neurogenetics, Yale School of Medicine, New Haven, CT 06510, USA.
Ofélia P Carvalho
Maryam Khurshid
James J Cox
Beyhan Tuysuz
Tanyeri Barak
Saliha Yilmaz
Okay Caglayan
Alp Dincer
Adeline K Nicholas
Oliver Quarrell
Kelly Springell
Gulshan Karbani
Saghira Malik
Caroline Gannon
Eamonn Sheridan
Moira Crosier
Steve N Lisgo
Susan Lindsay
Kaya Bilguvar
Fanni Gergely
Murat Gunel
C Geoffrey Woods
St James's University Hospital · GBCenter for Human Genetics · USYale University · USAddenbrooke's Hospital · GBNewcastle University · GBUniversity of Cambridge · GBAcıbadem University · TRCancer Research UK · GBCentre for Life · GBIstanbul University-Cerrahpaşa · TRQueen's University Belfast · GBSheffield Children's Hospital · GBWellcome Trust · GB

Funding

Gene Discovery in Recessive Structural Brain Disorders through Whole Exome SequenRC2NS070477 · NINDS · YALE UNIVERSITY · PI GUNEL, MURAT · 2009 to 2010
$2.9M
Medical Research Council G0700089Medical Research Council G9900837NINDS NIH HHS RC2 NS070477NINDS NIH HHS RC2NS070477Wellcome Trust
6 · The paper itself

Abstract

We investigated three families whose offspring had extreme microcephaly at birth and profound mental retardation. Brain scans and postmortem data showed that affected individuals had brains less than 10% of expected size (≤10 standard deviation) and that in addition to a massive reduction in neuron production they displayed partially deficient cortical lamination (microlissencephaly). Other body systems were apparently unaffected and overall growth was normal. We found two distinct homozygous mutations of NDE1, c.83+1G>T (p.Ala29GlnfsX114) in a Turkish family and c.684_685del (p.Pro229TrpfsX85) in two families of Pakistani origin. Using patient cells, we found that c.83+1G>T led to the use of a novel splice site and to a frameshift after NDE1 exon 2. Transfection of tagged NDE1 constructs showed that the c.684_685del mutation resulted in a NDE1 that was unable to localize to the centrosome. By staining a patient-derived cell line that carried the c.83+1G>T mutation, we found that this endogeneously expressed mutated protein equally failed to localize to the centrosome. By examining human and mouse embryonic brains, we determined that NDE1 is highly expressed in neuroepithelial cells of the developing cerebral cortex, particularly at the centrosome. We show that NDE1 accumulates on the mitotic spindle of apical neural precursors in early neurogenesis. Thus, NDE1 deficiency causes both a severe failure of neurogenesis and a deficiency in cortical lamination. Our data further highlight the importance of the centrosome in multiple aspects of neurodevelopment.

Indexed as

NeurogenesisAnimalsCell Cycle ProteinsCentrosomeCerebral CortexChild, PreschoolDNA Mutational AnalysisEpithelial CellsExonsFemaleGenetic LinkageHeLa CellsHomozygoteHumansInfantMaleCell Cycle ProteinsMicrotubule-Associated ProteinsNde1 protein, humanNde1 protein, mouseRNA, Messenger

Identifiers

PMID21529752
PMCPMC3146716
OpenAlexW2123342169

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.