Evidence map›Paper›PMID 21529717›Full record

ArticleCell2011

ClpX(P) generates mechanical force to unfold and translocate its protein substrates.

Rodrigo A Maillard, Gheorghe Chistol, Maya Sen, Maurizio Righini, Jiongyi Tan, Christian M Kaiser, Courtney Hodges, Andreas Martin, Carlos Bustamante

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 156 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
156citing papers in PubMed, 1 pooled it
18.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

156 citing papers in PubMed, 1 synthesis or guideline pooled it, 301 citations in OpenAlex.

  1. Pooled it
  2. Structural modeling reveals the mechanism of motor ATPase coordination during type IV pilus retraction.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  11. SNARE disassembly requires Sec18/NSF side loading.Nature structural & molecular biology · 2025
    Article
  12. Review
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  14. SNARE disassembly requires Sec18/NSF side-loading.bioRxiv : the preprint server for biology · 2025
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  19. Article
  20. Degron-controlled protein degradation inbioRxiv : the preprint server for biology · 2023
    Article

96 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Rodrigo A MaillardJason L. Choy Laboratory of Single-Molecule Biophysics, University of California, Berkeley, 94720, USA.
Gheorghe Chistol
Maya Sen
Maurizio Righini
Jiongyi Tan
Christian M Kaiser
Courtney Hodges
Andreas Martin
Carlos Bustamante
QB3 · USUniversity of California, Berkeley · US

Funding

THE PHYSICAL CHEMISTRY OF NUCLEIC ACIDSR01GM032543 · NIGMS · UNIVERSITY OF OREGON · PI CARLOS Jose BUSTAMANTE · 1985 to 2026
$6.4M
ATP-Dependent Protein Unfolding and Translocation by the Eukaryotic ProteasomeR01GM094497 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MARTIN, ANDREAS · 2011 to 2024
$3.7M
Single molecule analysis of nascent protein foldingK99GM086516 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI KAISER, CHRISTIAN · 2009 to 2010
$179k
Howard Hughes Medical InstituteNIGMS NIH HHS 5K99GM086516NIGMS NIH HHS K99 GM086516NIGMS NIH HHS R01 GM032543NIGMS NIH HHS R01-GM0325543NIGMS NIH HHS R01 GM094497
6 · The paper itself

Abstract

AAA(+) unfoldases denature and translocate polypeptides into associated peptidases. We report direct observations of mechanical, force-induced protein unfolding by the ClpX unfoldase from E. coli, alone, and in complex with the ClpP peptidase. ClpX hydrolyzes ATP to generate mechanical force and translocate polypeptides through its central pore. Threading is interrupted by pauses that are found to be off the main translocation pathway. ClpX's translocation velocity is force dependent, reaching a maximum of 80 aa/s near-zero force and vanishing at around 20 pN. ClpX takes 1, 2, or 3 nm steps, suggesting a fundamental step-size of 1 nm and a certain degree of intersubunit coordination. When ClpX encounters a folded protein, it either overcomes this mechanical barrier or slips on the polypeptide before making another unfolding attempt. Binding of ClpP decreases the slip probability and enhances the unfolding efficiency of ClpX. Under the action of ClpXP, GFP unravels cooperatively via a transient intermediate.

Indexed as

Protein FoldingProtein TransportAdenosine TriphosphatasesATPases Associated with Diverse Cellular ActivitiesBiomechanical PhenomenaEndopeptidase ClpEscherichia coliEscherichia coli ProteinsGreen Fluorescent ProteinsMolecular ChaperonesProtein DenaturationAdenosine TriphosphatasesATPases Associated with Diverse Cellular ActivitiesClpP protease, E coliClpX protein, E coliEndopeptidase ClpEscherichia coli ProteinsGreen Fluorescent ProteinsMolecular Chaperones

Identifiers

PMID21529717
PMCPMC3686100
OpenAlexW2113681346

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.