Evidence map›Paper›PMID 21527717›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Caenorhabditis elegans chromatin-associated proteins SET-2 and ASH-2 are differentially required for histone H3 Lys 4 methylation in embryos and adult germ cells.

Yu Xiao, Cécile Bedet, Valérie J P Robert, Thomas Simonet, Steve Dunkelbarger, Cédric Rakotomalala, Gwen Soete, Hendrik C Korswagen, Susan Strome, Francesca Palladino

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 110 citations in OpenAlex.

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  6. Epigenetic Echoes: Bridging Nature, Nurture, and Healing Across Generations.International journal of molecular sciences · 2025
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  10. Sterility in the offspring ofmicroPublication biology · 2024
    Article
  11. ThemicroPublication biology · 2024
    Article
  12. Epigenetics · 2023
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Yu XiaoLaboratory of Molecular and Cellular Biology, UMR5239 CNRS, Ecole Normale Supérieure de Lyon, 69007 Lyon, France.
Cécile Bedet
Valérie J P Robert
Thomas Simonet
Steve Dunkelbarger
Cédric Rakotomalala
Gwen Soete
Hendrik C Korswagen
Susan Strome
Francesca Palladino
École Normale Supérieure de Lyon · FRHubrecht Institute for Developmental Biology and Stem Cell Research · NLUniversité Claude Bernard Lyon 1 · FRIndiana University Bloomington · USUniversity of California, Santa Cruz · US

Funding

IMMUNOLOGIC STUDY OF GERM GRANULES IN C. ELEGANS EMBRY0SR01GM034059 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI STROME, SUSAN · 1985 to 2020
$8.9M
NIGMS NIH HHS GM34059NIGMS NIH HHS R01 GM034059
6 · The paper itself

Abstract

Methylation of histone H3 lysine 4 (H3K4me), a mark associated with gene activation, is mediated by SET1 and the related mixed lineage leukemia (MLL) histone methyltransferases (HMTs) across species. Mammals contain seven H3K4 HMTs, Set1A, Set1B, and MLL1-MLL5. The activity of SET1 and MLL proteins relies on protein-protein interactions within large multisubunit complexes that include three core components: RbBP5, Ash2L, and WDR5. It remains unclear how the composition and specificity of these complexes varies between cell types and during development. Caenorhabditis elegans contains one SET1 protein, SET-2, one MLL-like protein, SET-16, and single homologs of RbBP5, Ash2L, and WDR5. Here we show that SET-2 is responsible for the majority of bulk H3K4 methylation at all developmental stages. However, SET-2 and absent, small, or homeotic discs 2 (ASH-2) are differentially required for tri- and dimethylation of H3K4 (H3K4me3 and -me2) in embryos and adult germ cells. In embryos, whereas efficient H3K4me3 requires both SET-2 and ASH-2, H3K4me2 relies mostly on ASH-2. In adult germ cells by contrast, SET-2 serves a major role whereas ASH-2 is dispensable for H3K4me3 and most H3K4me2. Loss of SET-2 results in progressive sterility over several generations, suggesting an important function in the maintenance of a functional germ line. This study demonstrates that individual subunits of SET1-related complexes can show tissue specificity and developmental regulation and establishes C. elegans as a model to study SET1-related complexes in a multicellular organism.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEmbryo, NonmammalianGerm CellsHistone-Lysine N-MethyltransferaseHistonesLysineMethylationNuclear ProteinsSaccharomyces cerevisiae ProteinsASH-2 protein, C elegansCaenorhabditis elegans ProteinsHistone-Lysine N-MethyltransferaseHistonesLysineNuclear ProteinsSaccharomyces cerevisiae ProteinsSET1 protein, S cerevisiaeSET-2 protein, C elegans

Identifiers

PMID21527717
PMCPMC3100940
OpenAlexW2170075528

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.